Information for 16-RATCGATTTG (Motif 14)

C T A G C T G A A C G T A G T C A C T G G T C A C G A T G C A T C G A T C A T G
Reverse Opposite:
G T A C G C T A C G T A G C T A C A G T T G A C C T A G T G C A G A C T A G T C
p-value:1e-11
log p-value:-2.680e+01
Information Content per bp:1.649
Number of Target Sequences with motif151.0
Percentage of Target Sequences with motif3.41%
Number of Background Sequences with motif747.8
Percentage of Background Sequences with motif1.84%
Average Position of motif in Targets116.2 +/- 60.0bp
Average Position of motif in Background98.2 +/- 84.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ceh-28/MA1445.1/Jaspar

Match Rank:1
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-RATCGATTTG
AAATCGATTT-
 A C G T C T A G C T G A A C G T A G T C A C T G G T C A C G A T G C A T C G A T C A T G
G C T A C G T A T C G A A G C T G T A C A C T G C T G A A G C T G C A T C G A T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:2
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:RATCGATTTG-
-ATTGATTYND
 C T A G C T G A A C G T A G T C A C T G G T C A C G A T G C A T C G A T C A T G A C G T
A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

CUX1/MA0754.1/Jaspar

Match Rank:3
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-RATCGATTTG
NTATCGATTA-
 A C G T C T A G C T G A A C G T A G T C A C T G G T C A C G A T G C A T C G A T C A T G
C A G T A C G T C G T A G C A T A G T C T C A G T C G A G A C T G A C T C T G A A C G T

CUX2/MA0755.1/Jaspar

Match Rank:4
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-RATCGATTTG
TTATCGATTA-
 A C G T C T A G C T G A A C G T A G T C A C T G G T C A C G A T G C A T C G A T C A T G
C G A T C G A T C G T A G C A T G A T C T C A G T C G A G A C T G A C T C G T A A C G T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:5
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-RATCGATTTG
DGATCRATAN-
 A C G T C T A G C T G A A C G T A G T C A C T G G T C A C G A T G C A T C G A T C A T G
C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C A C G T

CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer

Match Rank:6
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--RATCGATTTG
NTNATCGATA--
 A C G T A C G T C T A G C T G A A C G T A G T C A C T G G T C A C G A T G C A T C G A T C A T G
G C A T A G C T C A G T T C G A A G C T G A T C C T A G T C G A A C G T T G C A A C G T A C G T

PH0044.1_Homez/Jaspar

Match Rank:7
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----RATCGATTTG---
AAAACATCGTTTTTAAG
 A C G T A C G T A C G T A C G T C T A G C T G A A C G T A G T C A C T G G T C A C G A T G C A T C G A T C A T G A C G T A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

ONECUT2/MA0756.1/Jaspar

Match Rank:8
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--RATCGATTTG--
ATTATCGATTTTTT
 A C G T A C G T C T A G C T G A A C G T A G T C A C T G G T C A C G A T G C A T C G A T C A T G A C G T A C G T
C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

PAX7/MA0680.1/Jaspar

Match Rank:9
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-RATCGATTTG
TAATCGATTA-
 A C G T C T A G C T G A A C G T A G T C A C T G G T C A C G A T G C A T C G A T C A T G
C G A T C T G A C G T A G A C T A G T C T C A G C T G A A C G T A C G T G C T A A C G T

PAX3/MA0780.1/Jaspar

Match Rank:10
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-RATCGATTTG
TAATCGATTA-
 A C G T C T A G C T G A A C G T A G T C A C T G G T C A C G A T G C A T C G A T C A T G
C G A T C T G A T C G A G A C T A G T C T C A G T C G A C A G T A G C T G C T A A C G T