Information for 13-GAATTGAACAGA (Motif 13)

T A C G T C G A T C G A G C A T G C A T A C T G C G T A T C G A T A G C G T C A C T A G G C T A
Reverse Opposite:
C G A T G A T C C A G T A T C G A G C T C G A T T G A C C G T A C G T A A G C T A G C T A T G C
p-value:1e-12
log p-value:-2.924e+01
Information Content per bp:1.693
Number of Target Sequences with motif120.0
Percentage of Target Sequences with motif2.71%
Number of Background Sequences with motif524.8
Percentage of Background Sequences with motif1.29%
Average Position of motif in Targets103.0 +/- 53.9bp
Average Position of motif in Background103.9 +/- 78.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AT3G10030/MA1662.1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GAATTGAACAGA---
--AGTTAACAGAAAT
 T A C G T C G A T C G A G C A T G C A T A C T G C G T A T C G A T A G C G T C A C T A G G C T A A C G T A C G T A C G T
A C G T A C G T G C T A C T A G G C A T G C A T T C G A C T G A G A T C C T G A C A T G G C T A C T G A C G T A G C A T

ct/MA0218.1/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GAATTGAACAGA
---TTGAAC---
 T A C G T C G A T C G A G C A T G C A T A C T G C G T A T C G A T A G C G T C A C T A G G C T A
A C G T A C G T A C G T A G C T G A C T C T A G C G T A C G T A A T G C A C G T A C G T A C G T

AT1G20910(ARID)/col-AT1G20910-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GAATTGAACAGA
THAATTRAWN---
 A C G T T A C G T C G A T C G A G C A T G C A T A C T G C G T A T C G A T A G C G T C A C T A G G C T A
A G C T G C T A C T G A C G T A A C G T A G C T C T A G C T G A C G T A A G C T A C G T A C G T A C G T

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GAATTGAACAGA
-TATTGAYY---
 T A C G T C G A T C G A G C A T G C A T A C T G C G T A T C G A T A G C G T C A C T A G G C T A
A C G T G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C A C G T A C G T A C G T

REF6(Zf)/Arabidopsis-REF6-ChIP-Seq(GSE106942)/Homer

Match Rank:5
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:GAATTGAACAGA---
-----AAACAGAGBA
 T A C G T C G A T C G A G C A T G C A T A C T G C G T A T C G A T A G C G T C A C T A G G C T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C G A C T G A G T A C T C G A T C A G T C G A T C A G A C T G T G C A

HSF1/MA0319.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GAATTGAACAGA
--ATGGAACA--
 T A C G T C G A T C G A G C A T G C A T A C T G C G T A T C G A T A G C G T C A C T A G G C T A
A C G T A C G T T C G A A C G T C T A G A C T G C G T A C G T A A G T C C T G A A C G T A C G T

Ct/dmmpmm(Noyes_hd)/fly

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAATTGAACAGA
-GCTTGAACAA-
 T A C G T C G A T C G A G C A T G C A T A C T G C G T A T C G A T A G C G T C A C T A G G C T A
A C G T A C G T A T G C A G C T G A C T C T A G C G T A C G T A A T G C A C G T A C G T A C G T

At2g41835(C2H2)/col-At2g41835-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GAATTGAACAGA
--TTTGAAAA--
 T A C G T C G A T C G A G C A T G C A T A C T G C G T A T C G A T A G C G T C A C T A G G C T A
A C G T A C G T G C A T A C G T A C G T A T C G C G T A C G T A C G T A C G T A A C G T A C G T

AT2G31460(REMB3)/col-AT2G31460-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------GAATTGAACAGA
WNWARWDGAAATGAT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T C G A T C G A G C A T G C A T A C T G C G T A T C G A T A G C G T C A C T A G G C T A
G C A T C G T A G C A T C G T A T C G A C G T A C T G A A C T G C G T A C G T A C G T A A C G T A C T G G T C A G C A T A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GAATTGAACAGA-
---TGGAACAGMA
 T A C G T C G A T C G A G C A T G C A T A C T G C G T A T C G A T A G C G T C A C T A G G C T A A C G T
A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A