Information for 7-CAGTTTGCATGA (Motif 9)

T A G C G C T A T A C G A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C T G C T G A
Reverse Opposite:
A G C T A G T C G T C A A C G T A C T G G T A C G T C A C G T A C G T A A G T C C A G T A C T G
p-value:1e-11
log p-value:-2.702e+01
Information Content per bp:1.866
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif10.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets112.2 +/- 54.0bp
Average Position of motif in Background98.7 +/- 40.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AtLEC2(ABI3/VP1)/Arabidopsis thaliana/AthaMap

Match Rank:1
Score:0.83
Offset:3
Orientation:reverse strand
Alignment:CAGTTTGCATGA-
---TTTGCATGGA
 T A G C G C T A T A C G A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C T G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C T G C T A G G T C A

POU5F1/MA1115.1/Jaspar

Match Rank:2
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:CAGTTTGCATGA
-NATTTGCATNN
 T A G C G C T A T A C G A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C T G C T G A
A C G T G T C A C G T A C G A T G A C T C G A T T C A G G A T C C T G A A G C T C G T A G C A T

ASD-1(RRM)/Caenorhabditis_elegans-RNCMPT00180-PBM/HughesRNA

Match Rank:3
Score:0.75
Offset:5
Orientation:forward strand
Alignment:CAGTTTGCATGA
-----TGCATGA
 T A G C G C T A T A C G A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C T G C T G A
A C G T A C G T A C G T A C G T A C G T C G A T A C T G A G T C C G T A A C G T A C T G G T C A

FUS3(ABI3VP1)/col-FUS3-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CAGTTTGCATGA--
DNNWTNTGCATGKNN
 A C G T T A G C G C T A T A C G A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C T G C T G A A C G T A C G T
C G A T C A G T G T C A G C T A C A G T A G C T A C G T A C T G A G T C C G T A A C G T A C T G A C G T C T G A T C G A

FOX-1(RRM)/Caenorhabditis_elegans-RNCMPT00017-PBM/HughesRNA

Match Rank:5
Score:0.73
Offset:5
Orientation:forward strand
Alignment:CAGTTTGCATGA
-----TGCATGA
 T A G C G C T A T A C G A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C T G C T G A
A C G T A C G T A C G T A C G T A C G T C G A T A C T G A G T C C G T A A C G T A C T G G T C A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.72
Offset:2
Orientation:forward strand
Alignment:CAGTTTGCATGA
--ATTTGCATAA
 T A G C G C T A T A C G A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C T G C T G A
A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

A2BP1(RRM)/Drosophila_melanogaster-RNCMPT00123-PBM/HughesRNA

Match Rank:7
Score:0.71
Offset:4
Orientation:forward strand
Alignment:CAGTTTGCATGA
----NTGCATGC
 T A G C G C T A T A C G A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C T G C T G A
A C G T A C G T A C G T A C G T C T A G C G A T A C T G A G T C C G T A A C G T A C T G T G A C

RBFOX1(RRM)/Homo_sapiens-RNCMPT00168-PBM/HughesRNA

Match Rank:8
Score:0.71
Offset:5
Orientation:forward strand
Alignment:CAGTTTGCATGA
-----TGCATGC
 T A G C G C T A T A C G A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C T G C T G A
A C G T A C G T A C G T A C G T A C G T C G A T A C T G A G T C C G T A A C G T A C T G G T A C

LEC2/MA0581.1/Jaspar

Match Rank:9
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CAGTTTGCATGA-
--ATGTGCATGNN
 T A G C G C T A T A C G A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C T G C T G A A C G T
A C G T A C G T C G T A C G A T C A T G A G C T A C T G A G T C C G T A A C G T C T A G A T G C G T C A

POU2F2/MA0507.1/Jaspar

Match Rank:10
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CAGTTTGCATGA
TTCATTTGCATAT
 A C G T T A G C G C T A T A C G A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C T G C T G A
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T