Information for 4-TGCAGCCG (Motif 7)

C A G T T A C G T A G C G C T A A C T G G A T C A T G C C T A G
Reverse Opposite:
A G T C T A C G C T A G G T A C C G A T A T C G A T G C G T C A
p-value:1e-12
log p-value:-2.980e+01
Information Content per bp:1.648
Number of Target Sequences with motif369.0
Percentage of Target Sequences with motif13.59%
Number of Background Sequences with motif4308.0
Percentage of Background Sequences with motif9.25%
Average Position of motif in Targets100.9 +/- 51.4bp
Average Position of motif in Background98.5 +/- 57.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERF112/MA1002.1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TGCAGCCG---
-GCCGCCGCCA
 C A G T T A C G T A G C G C T A A C T G G A T C A T G C C T A G A C G T A C G T A C G T
A C G T T A C G A T G C T G A C C A T G A T G C T G A C C T A G G A T C G T A C C T G A

ERF115(AP2EREBP)/colamp-ERF115-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:TGCAGCCG----
--VCGCCGYMAW
 C A G T T A C G T A G C G C T A A C T G G A T C A T G C C T A G A C G T A C G T A C G T A C G T
A C G T A C G T T A G C T G A C A C T G A G T C A G T C C T A G G A T C G T C A C G T A G C A T

At2g33710(AP2EREBP)/colamp-At2g33710-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:TGCAGCCG----
--YMGCCGCMAW
 C A G T T A C G T A G C G C T A A C T G G A T C A T G C C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A G T C T G A C A C T G A T G C G T A C C T A G G A T C G T A C C G T A G C A T

ERF069/MA0997.1/Jaspar

Match Rank:4
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TGCAGCCG---
--GCGCCGCCA
 C A G T T A C G T A G C G C T A A C T G G A T C A T G C C T A G A C G T A C G T A C G T
A C G T A C G T A T C G T G A C C T A G T A G C G A T C C T A G A G T C T G A C C T G A

RAP26(AP2EREBP)/colamp-RAP26-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:TGCAGCCG------
--CCGCCGCCATHD
 C A G T T A C G T A G C G C T A A C T G G A T C A T G C C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C G T A C C T A G A G T C G T A C C T A G G A T C G T A C C G T A G C A T G C A T C G A T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TGCAGCCG
--CAGCC-
 C A G T T A C G T A G C G C T A A C T G G A T C A T G C C T A G
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

STP1/MA0394.1/Jaspar

Match Rank:7
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:TGCAGCCG--
--GCGCCGCA
 C A G T T A C G T A G C G C T A A C T G G A T C A T G C C T A G A C G T A C G T
A C G T A C G T T A C G G T A C A C T G A G T C G T A C A C T G A G T C T C G A

ERF094/MA1049.1/Jaspar

Match Rank:8
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TGCAGCCG
CGCCGCCG
 C A G T T A C G T A G C G C T A A C T G G A T C A T G C C T A G
T G A C A C T G A G T C G T A C C T A G A T G C A G T C C T A G

Adf1/dmmpmm(Pollard)/fly

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGCAGCCG
CGCGGTCG
 C A G T T A C G T A G C G C T A A C T G G A T C A T G C C T A G
A G T C A C T G A G T C C T A G C T A G A G C T A G T C A C T G

ERF15(AP2EREBP)/colamp-ERF15-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TGCAGCCG-
WDHAGCMGCCAT
 A C G T A C G T A C G T C A G T T A C G T A G C G C T A A C T G G A T C A T G C C T A G A C G T
G C A T C G A T G A C T T G C A A C T G A G T C T G A C A C T G G A T C A G T C C G T A G A C T