Information for 3-TTGWACGA (Motif 5)

G A C T C A G T A C T G G C A T C T G A A T G C A C T G C G T A
Reverse Opposite:
C G A T A G T C A T C G G A C T C G T A T G A C G T C A C T G A
p-value:1e-13
log p-value:-2.995e+01
Information Content per bp:1.696
Number of Target Sequences with motif959.0
Percentage of Target Sequences with motif35.32%
Number of Background Sequences with motif13409.2
Percentage of Background Sequences with motif28.79%
Average Position of motif in Targets102.7 +/- 54.6bp
Average Position of motif in Background99.6 +/- 62.1bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

UPC2/MA0411.1/Jaspar

Match Rank:1
Score:0.80
Offset:1
Orientation:forward strand
Alignment:TTGWACGA
-TATACGA
 G A C T C A G T A C T G G C A T C T G A A T G C A C T G C G T A
A C G T A G C T C T G A C G A T C G T A A G T C C T A G T C G A

ARF16(ARF)/col-ARF16-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-TTGWACGA-
ATTTTACGAT
 A C G T G A C T C A G T A C T G G C A T C T G A A T G C A C T G C G T A A C G T
C T G A C G A T A C G T A C G T A C G T C T G A A G T C A C T G C G T A A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:3
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-TTGWACGA--
NTTTTACGACT
 A C G T G A C T C A G T A C T G G C A T C T G A A T G C A C T G C G T A A C G T A C G T
C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T

HOXC12/MA0906.1/Jaspar

Match Rank:4
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-TTGWACGA--
NTTTTACGACC
 A C G T G A C T C A G T A C T G G C A T C T G A A T G C A C T G C G T A A C G T A C G T
C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C

HOXC11/MA0651.1/Jaspar

Match Rank:5
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-TTGWACGA--
NTTTTACGACC
 A C G T G A C T C A G T A C T G G C A T C T G A A T G C A C T G C G T A A C G T A C G T
C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C

SPL5(SBP)/colamp-SPL5-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-TTGWACGA---
NNHGTACGGHNN
 A C G T G A C T C A G T A C T G G C A T C T G A A T G C A C T G C G T A A C G T A C G T A C G T
C G T A G C A T G A C T C T A G A C G T G T C A A G T C A C T G C T A G G C T A G T A C G C T A

HOXC9/MA0485.2/Jaspar

Match Rank:7
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-TTGWACGA-
NTTTTACGAC
 A C G T G A C T C A G T A C T G G C A T C T G A A T G C A C T G C G T A A C G T
C T G A C G A T A C G T A C G T C G A T G T C A A G T C A C T G C T G A A G T C

HOXB9/MA1503.1/Jaspar

Match Rank:8
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-TTGWACGA-
NTTTTACGAC
 A C G T G A C T C A G T A C T G G C A T C T G A A T G C A C T G C G T A A C G T
C T G A C G A T C A G T A C G T C G A T G T C A A G T C A C T G C T G A A G T C

HOXD11/MA0908.1/Jaspar

Match Rank:9
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-TTGWACGA-
NTTTTACGAC
 A C G T G A C T C A G T A C T G G C A T C T G A A T G C A C T G C G T A A C G T
C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C

Hoxa11/MA0911.1/Jaspar

Match Rank:10
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--TTGWACGA--
ANTTTTACGACC
 A C G T A C G T G A C T C A G T A C T G G C A T C T G A A T G C A C T G C G T A A C G T A C G T
G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C