Information for 4-GTTGGTCTAGCT (Motif 4)

C A T G C G A T A C G T A C T G C T A G C G A T A T G C C G A T G C T A A T C G G A T C A C G T
Reverse Opposite:
T G C A C T A G T A G C C G A T C G T A T A C G G C T A G A T C T A G C G T C A G C T A G T A C
p-value:1e-13
log p-value:-3.047e+01
Information Content per bp:1.703
Number of Target Sequences with motif62.0
Percentage of Target Sequences with motif2.28%
Number of Background Sequences with motif348.1
Percentage of Background Sequences with motif0.75%
Average Position of motif in Targets102.4 +/- 52.2bp
Average Position of motif in Background96.9 +/- 54.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

kni/dmmpmm(Bigfoot)/fly

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GTTGGTCTAGCT--
-TTGNTCCANTTTT
 C A T G C G A T A C G T A C T G C T A G C G A T A T G C C G A T G C T A A T C G G A T C A C G T A C G T A C G T
A C G T A C G T A G C T C T A G A G C T A G C T A G T C A G T C T G C A C T A G C G A T C G A T G C A T G A C T

kni/dmmpmm(SeSiMCMC)/fly

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GTTGGTCTAGCT--
-TTGNTCCAGTTTT
 C A T G C G A T A C G T A C T G C T A G C G A T A T G C C G A T G C T A A T C G G A T C A C G T A C G T A C G T
A C G T A C G T A G C T C A T G A C G T A G C T A G T C A G T C T G C A C T A G C G A T C G A T G C A T G A C T

kni/dmmpmm(Noyes)/fly

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTTGGTCTAGCT-
-GTGCTCTAGTTT
 C A T G C G A T A C G T A C T G C T A G C G A T A T G C C G A T G C T A A T C G G A T C A C G T A C G T
A C G T A T C G A G C T C T A G T A G C G A C T G T A C A G C T C T G A T A C G C G A T A C G T G C A T

kni/MA0451.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GTTGGTCTAGCT-
-GTGCTCTANTTT
 C A T G C G A T A C G T A C T G C T A G C G A T A T G C C G A T G C T A A T C G G A T C A C G T A C G T
A C G T A T C G A G C T A C T G T G A C G A C T A G T C A G C T T C G A T A C G C G A T A C G T G C A T

ZNF638(RRM)/Homo_sapiens-RNCMPT00164-PBM/HughesRNA

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTTGGTCTAGCT
TGTTCGT------
 A C G T C A T G C G A T A C G T A C T G C T A G C G A T A T G C C G A T G C T A A T C G G A T C A C G T
A G C T A C T G A C G T A C G T A T G C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HAP2/MA0313.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTTGGTCTAGCT
-TTGGT------
 C A T G C G A T A C G T A C T G C T A G C G A T A T G C C G A T G C T A A T C G G A T C A C G T
A C G T A C G T A C G T C T A G A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Smad4/MA1153.1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GTTGGTCTAGCT
---TGTCTAGA-
 C A T G C G A T A C G T A C T G C T A G C G A T A T G C C G A T G C T A A T C G G A T C A C G T
A C G T A C G T A C G T G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T

ZNF449/MA1656.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTTGGTCTAGCT
NNGGTTGGGCTTNN-
 A C G T A C G T A C G T C A T G C G A T A C G T A C T G C T A G C G A T A T G C C G A T G C T A A T C G G A T C A C G T
A T G C C A G T C A T G A C T G G A C T C G A T C A T G A C T G A T C G A G T C C G A T A C G T A C T G C A T G A C G T

MYB107(MYB)/col-MYB107-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GTTGGTCTAGCT
RGTWGGTRRR---
 A C G T C A T G C G A T A C G T A C T G C T A G C G A T A T G C C G A T G C T A A T C G G A T C A C G T
C T A G A C T G A C G T C G T A A C T G A C T G A C G T T C A G C T G A T C G A A C G T A C G T A C G T

FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTTGGTCTAGCT
TGTTTAYTTAGC-
 A C G T C A T G C G A T A C G T A C T G C T A G C G A T A T G C C G A T G C T A A T C G G A T C A C G T
C G A T C T A G A C G T A C G T A C G T C G T A A G C T C G A T A G C T C G T A C T A G T A G C A C G T