Information for 20-GGTATATATA (Motif 31)

C T A G C T A G A C G T G T C A C G A T C G T A G A C T T G C A C A G T T C G A
Reverse Opposite:
A G C T G C T A A C G T C T G A G C A T G C T A C A G T G T C A G A T C G A T C
p-value:1e-5
log p-value:-1.239e+01
Information Content per bp:1.647
Number of Target Sequences with motif181.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif2204.4
Percentage of Background Sequences with motif4.73%
Average Position of motif in Targets102.7 +/- 55.5bp
Average Position of motif in Background99.0 +/- 59.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Cf2/dmmpmm(Bergman)/fly

Match Rank:1
Score:0.88
Offset:1
Orientation:forward strand
Alignment:GGTATATATA
-GTATATATA
 C T A G C T A G A C G T G T C A C G A T C G T A G A C T T G C A C A G T T C G A
A C G T T C A G A G C T C T G A A G C T T C G A G A C T C T G A A G C T T C G A

Cf2/MA0015.1/Jaspar

Match Rank:2
Score:0.88
Offset:1
Orientation:forward strand
Alignment:GGTATATATA-
-GTATATATAC
 C T A G C T A G A C G T G T C A C G A T C G T A G A C T T G C A C A G T T C G A A C G T
A C G T T C A G A G C T T C G A A G C T G T C A A G C T T C G A G A C T C T G A A G T C

SPT15/MA0386.1/Jaspar

Match Rank:3
Score:0.87
Offset:-5
Orientation:forward strand
Alignment:-----GGTATATATA------
GACTAGATATATATATTCGAT
 A C G T A C G T A C G T A C G T A C G T C T A G C T A G A C G T G T C A C G A T C G T A G A C T T G C A C A G T T C G A A C G T A C G T A C G T A C G T A C G T A C G T
T C A G G C T A G A T C G A C T C G T A T C A G C T G A G C A T C G T A C A G T C G T A C G A T C G T A G C A T C G T A C G A T C G A T T A G C T C A G G C T A C A G T

TBP(- other)/several species/AthaMap

Match Rank:4
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:GGTATATATA--
GGTATTTATAGN
 C T A G C T A G A C G T G T C A C G A T C G T A G A C T T G C A C A G T T C G A A C G T A C G T
A C T G T A C G G A C T C G T A G A C T C G A T A C G T C T G A C G A T C G T A C A T G C G A T

PB0163.1_Six6_2/Jaspar

Match Rank:5
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---GGTATATATA----
ANNNGGATATATCCNNN
 A C G T A C G T A C G T C T A G C T A G A C G T G T C A C G A T C G T A G A C T T G C A C A G T T C G A A C G T A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

SeqBias: TA-repeat

Match Rank:6
Score:0.81
Offset:2
Orientation:forward strand
Alignment:GGTATATATA--
--TATATATATA
 C T A G C T A G A C G T G T C A C G A T C G T A G A C T T G C A C A G T T C G A A C G T A C G T
A C G T A C G T C G A T C G T A C G A T C G T A C G A T C G T A C G A T C G T A C G A T C G T A

RBMS3(RRM)/Homo_sapiens-RNCMPT00057-PBM/HughesRNA

Match Rank:7
Score:0.78
Offset:3
Orientation:forward strand
Alignment:GGTATATATA
---ATATATA
 C T A G C T A G A C G T G T C A C G A T C G T A G A C T T G C A C A G T T C G A
A C G T A C G T A C G T G T C A A G C T C G T A A C G T C G T A A C G T G T C A

RBMS3(RRM)/Homo_sapiens-RNCMPT00173-PBM/HughesRNA

Match Rank:8
Score:0.77
Offset:4
Orientation:forward strand
Alignment:GGTATATATA-
----TATATAN
 C T A G C T A G A C G T G T C A C G A T C G T A G A C T T G C A C A G T T C G A A C G T
A C G T A C G T A C G T A C G T G A C T C G T A A C G T C G T A C G A T C G T A A T C G

PB0080.1_Tbp_1/Jaspar

Match Rank:9
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--GGTATATATA----
NANTTATATATAANGN
 A C G T A C G T C T A G C T A G A C G T G T C A C G A T C G T A G A C T T G C A C A G T T C G A A C G T A C G T A C G T A C G T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

PB0198.1_Zfp128_2/Jaspar

Match Rank:10
Score:0.77
Offset:0
Orientation:forward strand
Alignment:GGTATATATA----
TGTATATATATACC
 C T A G C T A G A C G T G T C A C G A T C G T A G A C T T G C A C A G T T C G A A C G T A C G T A C G T A C G T
C A G T C A T G G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G A C T C G T A T G A C A T G C