Information for 3-TCATCGACTTGT (Motif 3)

A G C T A G T C C G T A A C G T A G T C C T A G G C T A A G T C A C G T A C G T A T C G A G C T
Reverse Opposite:
C T G A T A G C G T C A G T C A A C T G C A G T A G T C C T A G G T C A A C G T A C T G C T G A
p-value:1e-13
log p-value:-3.136e+01
Information Content per bp:1.868
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif37.4
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets101.8 +/- 45.7bp
Average Position of motif in Background116.0 +/- 49.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DOT6/MA0351.1/Jaspar

Match Rank:1
Score:0.68
Offset:-9
Orientation:forward strand
Alignment:---------TCATCGACTTGT
TTCTGCACCTCATCGCATCCT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C C G T A A C G T A G T C C T A G G C T A A G T C A C G T A C G T A T C G A G C T
C G A T A C G T A G T C A C G T C A T G A G T C C G T A A T G C T A G C A C G T A T G C C G T A C A G T A G T C C A T G T G A C T G C A G A C T A T G C A G T C C A G T

TOD6/MA0350.1/Jaspar

Match Rank:2
Score:0.67
Offset:-9
Orientation:forward strand
Alignment:---------TCATCGACTTGT
AGGCACAGCTCATCGCGTTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C C G T A A C G T A G T C C T A G G C T A A G T C A C G T A C G T A T C G A G C T
C G T A A C T G A C T G G T A C C G T A G A T C C G T A A T C G T A G C A C G T A G T C C G T A A C G T A G T C C A T G T A G C T A C G G A C T G A C T G C A T C A G T

RBP1-LIKE(RRM)/Drosophila_melanogaster-RNCMPT00127-PBM/HughesRNA

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TCATCGACTTGT
ATCAACG------
 A C G T A G C T A G T C C G T A A C G T A G T C C T A G G C T A A G T C A C G T A C G T A T C G A G C T
C G T A C G A T A G T C C G T A C G T A A G T C C T A G A C G T A C G T A C G T A C G T A C G T A C G T

RBM47(RRM)/Gallus_gallus-RNCMPT00279-PBM/HughesRNA

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TCATCGACTTGT
NATCATC-------
 A C G T A C G T A G C T A G T C C G T A A C G T A G T C C T A G G C T A A G T C A C G T A C G T A T C G A G C T
G C T A C G T A A C G T A T G C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rbm47(RRM)/Xenopus_tropicalis-RNCMPT00280-PBM/HughesRNA

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TCATCGACTTGT
NATCATC-------
 A C G T A C G T A G C T A G T C C G T A A C G T A G T C C T A G G C T A A G T C A C G T A C G T A T C G A G C T
C T G A C G T A A C G T A T G C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

bHLH130/MA1358.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TCATCGACTTGT-
--AGCAACTTGCA
 A G C T A G T C C G T A A C G T A G T C C T A G G C T A A G T C A C G T A C G T A T C G A G C T A C G T
A C G T A C G T C T G A A C T G A T G C G T C A C G T A G T A C C G A T C G A T A C T G G A T C G T C A

AT1G44830(AP2EREBP)/col-AT1G44830-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCATCGACTTGT
NCCACCGACA---
 A C G T A G C T A G T C C G T A A C G T A G T C C T A G G C T A A G T C A C G T A C G T A T C G A G C T
G A T C A T G C A G T C C G T A A G T C A G T C A C T G G C T A A G T C C G T A A C G T A C G T A C G T

DREB2(AP2EREBP)/col-DREB2-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCATCGACTTGT
TMACCGACATWA
 A G C T A G T C C G T A A C G T A G T C C T A G G C T A A G T C A C G T A C G T A T C G A G C T
G C A T T G A C C T G A A G T C A G T C A C T G G T C A A G T C G C T A G A C T G C T A C T G A

WRKY17(WRKY)/colamp-WRKY17-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCATCGACTTGT
GCGTTGACTTTT
 A G C T A G T C C G T A A C G T A G T C C T A G G C T A A G T C A C G T A C G T A T C G A G C T
A C T G T G A C A C T G A C G T A C G T A C T G C G T A A G T C A G C T C G A T G C A T A C G T

PHYPADRAFT_182268/MA1008.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TCATCGACTTGT
NCACCGACAN--
 A G C T A G T C C G T A A C G T A G T C C T A G G C T A A G T C A C G T A C G T A T C G A G C T
A G C T A G T C C T G A A G T C A G T C A C T G C G T A A G T C G T C A C G T A A C G T A C G T