Information for 16-CATGAYTGTT (Motif 28)

G A T C T G C A C G A T A C T G C T G A A G C T C A G T C A T G A G C T C A G T
Reverse Opposite:
G T C A T C G A G T A C G T C A T C G A G A C T T G A C G C T A A C G T C T A G
p-value:1e-7
log p-value:-1.810e+01
Information Content per bp:1.531
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif2.14%
Number of Background Sequences with motif433.3
Percentage of Background Sequences with motif0.93%
Average Position of motif in Targets93.3 +/- 61.5bp
Average Position of motif in Background99.4 +/- 59.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HAT1/MA1024.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CATGAYTGTT
NAATGATTGN-
 A C G T G A T C T G C A C G A T A C T G C T G A A G C T C A G T C A T G A G C T C A G T
A G C T G T C A C G T A A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----CATGAYTGTT
NNTNTCATGAATGT-
 A C G T A C G T A C G T A C G T A C G T G A T C T G C A C G A T A C T G C T G A A G C T C A G T C A T G A G C T C A G T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T

HAT22/MA1210.1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CATGAYTGTT
AATGATTANT
 G A T C T G C A C G A T A C T G C T G A A G C T C A G T C A T G A G C T C A G T
G C T A C T G A A C G T A T C G C T G A A C G T A C G T C T G A C T A G C A G T

ATHB-12/MA0950.1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CATGAYTGTT
AATGATTG--
 G A T C T G C A C G A T A C T G C T G A A G C T C A G T C A T G A G C T C A G T
G T C A C G T A G A C T A T C G C T G A C A G T C G A T C T A G A C G T A C G T

bab1/dmmpmm(Pollard)/fly

Match Rank:5
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CATGAYTGTT
TATTATTATT
 G A T C T G C A C G A T A C T G C T G A A G C T C A G T C A T G A G C T C A G T
C G A T C G T A A C G T C G A T C G T A C G A T A C G T C T A G A C G T A C G T

Tv_0259(RRM)/Trichomonas_vaginalis-RNCMPT00259-PBM/HughesRNA

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CATGAYTGTT
NCATGGT----
 A C G T G A T C T G C A C G A T A C T G C T G A A G C T C A G T C A T G A G C T C A G T
G A C T A G T C C G T A A C G T A C T G C T A G A C G T A C G T A C G T A C G T A C G T

ATHB7(Homeobox)/col-ATHB7-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CATGAYTGTT
AATGATTG--
 G A T C T G C A C G A T A C T G C T G A A G C T C A G T C A T G A G C T C A G T
G T C A C G T A A C G T A T C G C G T A A C G T A C G T C T A G A C G T A C G T

ATHB6(Homeobox)/Arabidopsis-HB6-ChIP-Seq(GSE80564)/Homer

Match Rank:8
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CATGAYTGTT
NVAATNATTG--
 A C G T A C G T G A T C T G C A C G A T A C T G C T G A A G C T C A G T C A T G A G C T C A G T
G A T C T A G C G T C A G C T A G A C T A C G T G C T A C G A T C A G T T C A G A C G T A C G T

ATHB-5/MA0110.3/Jaspar

Match Rank:9
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CATGAYTGTT
NNAATGATTGNN
 A C G T A C G T G A T C T G C A C G A T A C T G C T G A A G C T C A G T C A T G A G C T C A G T
G C A T G C A T G C T A C G T A G C A T C T A G C G T A C G A T C G A T C T A G C G T A C G A T

ATHB6(Homeobox)/col-ATHB6-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CATGAYTGTT
AATGATTG--
 G A T C T G C A C G A T A C T G C T G A A G C T C A G T C A T G A G C T C A G T
G C T A C G T A A C G T A T C G C G T A A C G T A C G T C T A G A C G T A C G T