Motif 27

Information for 10-CGGCCGAG (Motif 27)

Reverse Opposite:

p-value:	1e-7
log p-value:	-1.842e+01
Information Content per bp:	1.890
Number of Target Sequences with motif	119.0
Percentage of Target Sequences with motif	4.38%
Number of Background Sequences with motif	1170.1
Percentage of Background Sequences with motif	2.51%
Average Position of motif in Targets	104.3 +/- 49.6bp
Average Position of motif in Background	99.4 +/- 61.6bp
Strand Bias (log2 ratio + to - strand density)	0.0
Multiplicity (# of sites on avg that occur together)	1.04
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

YLL054C/MA0429.1/Jaspar

Match Rank:	1
Score:	0.89
Offset:	0
Orientation:	forward strand
Alignment:	CGGCCGAG CGGCCGA-

RDS1/RDS1_H2O2Hi/[](Harbison)/Yeast

Match Rank:	2
Score:	0.89
Offset:	-1
Orientation:	forward strand
Alignment:	-CGGCCGAG TCGGCCGA-

IME1/MA0320.1/Jaspar

Match Rank:	3
Score:	0.85
Offset:	0
Orientation:	forward strand
Alignment:	CGGCCGAG CCGCCGAG

RDS1(MacIsaac)/Yeast

Match Rank:	4
Score:	0.85
Offset:	0
Orientation:	forward strand
Alignment:	CGGCCGAG CGGCCG--

RDS1/MA0361.1/Jaspar

Match Rank:	5
Score:	0.85
Offset:	0
Orientation:	forward strand
Alignment:	CGGCCGAG CGGCCGA-

IME1(MacIsaac)/Yeast

Match Rank:	6
Score:	0.83
Offset:	0
Orientation:	forward strand
Alignment:	CGGCCGAG CCGCCGAG

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:	7
Score:	0.73
Offset:	0
Orientation:	forward strand
Alignment:	CGGCCGAG AGGCCTAG

SKN7/MA0381.1/Jaspar

Match Rank:	8
Score:	0.72
Offset:	-1
Orientation:	reverse strand
Alignment:	-CGGCCGAG NTGGCC---

ERF115(AP2EREBP)/colamp-ERF115-DAP-Seq(GSE60143)/Homer

Match Rank:	9
Score:	0.71
Offset:	-4
Orientation:	forward strand
Alignment:	----CGGCCGAG WTKRCGGCGB--

LEP(AP2EREBP)/col-LEP-DAP-Seq(GSE60143)/Homer

Match Rank:	10
Score:	0.71
Offset:	-2
Orientation:	reverse strand
Alignment:	--CGGCCGAG GACGGCGGHG