Information for 13-GACGTTGTGC (Motif 25)

T C A G C T G A G T A C A C T G A C G T A C G T A C T G A G C T A C T G A G T C
Reverse Opposite:
A C T G G T A C C T G A A G T C C G T A C G T A A G T C A C T G A G C T A G T C
p-value:1e-8
log p-value:-1.953e+01
Information Content per bp:1.863
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif71.7
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets128.2 +/- 50.9bp
Average Position of motif in Background101.0 +/- 64.0bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RBP1(RRM)/Drosophila_melanogaster-RNCMPT00058-PBM/HughesRNA

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GACGTTGTGC
-TCGTTGT--
 T C A G C T G A G T A C A C T G A C G T A C G T A C T G A G C T A C T G A G T C
A C G T A G C T A G T C A C T G A C G T A C G T A C T G C G A T A C G T A C G T

NCU08034(RRM)/Neurospora_crassa-RNCMPT00209-PBM/HughesRNA

Match Rank:2
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:GACGTTGTGC--
----NTGTGCTA
 T C A G C T G A G T A C A C T G A C G T A C G T A C T G A G C T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G C T A C T G A C G T A C T G A G T C C G A T C G T A

MEC-8(RRM)/Caenorhabditis_elegans-RNCMPT00181-PBM/HughesRNA

Match Rank:3
Score:0.70
Offset:5
Orientation:reverse strand
Alignment:GACGTTGTGC--
-----TGTGCAN
 T C A G C T G A G T A C A C T G A C G T A C G T A C T G A G C T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A G C A T

CPO(RRM)/Drosophila_melanogaster-RNCMPT00133-PBM/HughesRNA

Match Rank:4
Score:0.70
Offset:5
Orientation:reverse strand
Alignment:GACGTTGTGC--
-----TGTGCAN
 T C A G C T G A G T A C A C T G A C G T A C G T A C T G A G C T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A G A C T

UNC-75(RRM)/Caenorhabditis_elegans-RNCMPT00081-PBM/HughesRNA

Match Rank:5
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GACGTTGTGC
--TGTTGTG-
 T C A G C T G A G T A C A C T G A C G T A C G T A C T G A G C T A C T G A G T C
A C G T A C G T A C G T C T A G A C G T C G A T A C T G A C G T C T A G A C G T

CEBPD/MA0836.2/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GACGTTGTGC----
-NNATTGTGCAATN
 T C A G C T G A G T A C A C T G A C G T A C G T A C T G A G C T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T C G T A C G A T T C G A G A C T C A G T C T A G G A C T C T A G G T A C G T C A C T G A A G C T G T C A

HMRA1/MA0327.1/Jaspar

Match Rank:7
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GACGTTGTGC
---ATTGTGC
 T C A G C T G A G T A C A C T G A C G T A C G T A C T G A G C T A C T G A G T C
A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C T G A G C T

MATA1(MacIsaac)/Yeast

Match Rank:8
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GACGTTGTGC
---ATTGTGC
 T C A G C T G A G T A C A C T G A C G T A C G T A C T G A G C T A C T G A G T C
A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C T G A G C T

DAL82(MacIsaac)/Yeast

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GACGTTGTGC
AAANTTGCGC
 T C A G C T G A G T A C A C T G A C G T A C G T A C T G A G C T A C T G A G T C
C T G A G C T A C G T A T C A G C G A T G A C T T C A G G A T C C T A G G A T C

SNRPA(RRM)/Homo_sapiens-RNCMPT00071-PBM/HughesRNA

Match Rank:10
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:GACGTTGTGC--
-----TGTGCAA
 T C A G C T G A G T A C A C T G A C G T A C G T A C T G A G C T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C T G A C G T A C T G A G T C C G T A C G T A