Information for 10-TVCGGTGCAM (Motif 22)

A G C T T A C G G A T C T A C G T C A G C A G T A T C G T A G C C T G A G T C A
Reverse Opposite:
C A G T G A C T A T C G T A G C G T C A A G T C A T G C C T A G A T G C T C G A
p-value:1e-9
log p-value:-2.104e+01
Information Content per bp:1.614
Number of Target Sequences with motif78.0
Percentage of Target Sequences with motif2.87%
Number of Background Sequences with motif619.3
Percentage of Background Sequences with motif1.33%
Average Position of motif in Targets101.4 +/- 55.2bp
Average Position of motif in Background94.1 +/- 59.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ABI4(2)(AP2/EREBP)/Zea mays/AthaMap

Match Rank:1
Score:0.78
Offset:2
Orientation:forward strand
Alignment:TVCGGTGCAM--
--CGGTGCTTCC
 A G C T T A C G G A T C T A C G T C A G C A G T A T C G T A G C C T G A G T C A A C G T A C G T
A C G T A C G T A G T C A C T G A C T G A G C T A C T G A T G C A G C T A G C T A G T C A G T C

ESE3(AP2EREBP)/col-ESE3-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.75
Offset:0
Orientation:forward strand
Alignment:TVCGGTGCAM
GACGGTGG--
 A G C T T A C G G A T C T A C G T C A G C A G T A T C G T A G C C T G A G T C A
C A T G C T G A A G T C A C T G A C T G A G C T A C T G A T C G A C G T A C G T

Run/dmmpmm(Papatsenko)/fly

Match Rank:3
Score:0.75
Offset:0
Orientation:forward strand
Alignment:TVCGGTGCAM
GGCGGTG---
 A G C T T A C G G A T C T A C G T C A G C A G T A T C G T A G C C T G A G T C A
A C T G A C T G A G T C A C T G A C T G A C G T A C T G A C G T A C G T A C G T

At1g75490(AP2EREBP)/colamp-At1g75490-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TVCGGTGCAM
AGKCGGTG---
 A C G T A G C T T A C G G A T C T A C G T C A G C A G T A T C G T A G C C T G A G T C A
C G T A C T A G C A G T A G T C A C T G A C T G A G C T A C T G A C G T A C G T A C G T

RCS1(MacIsaac)/Yeast

Match Rank:5
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:TVCGGTGCAM
--GGGTGCA-
 A G C T T A C G G A T C T A C G T C A G C A G T A T C G T A G C C T G A G T C A
A C G T A C G T T C A G C T A G A T C G A G C T C T A G A G T C T C G A A C G T

AT3G57600(AP2EREBP)/col-AT3G57600-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TVCGGTGCAM
GGCGGTGG--
 A G C T T A C G G A T C T A C G T C A G C A G T A T C G T A G C C T G A G T C A
C T A G A C T G A G T C A C T G A C T G A G C T A C T G T C A G A C G T A C G T

AT1G44830(AP2EREBP)/col-AT1G44830-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TVCGGTGCAM
TGTCGGTGGN-
 A C G T A G C T T A C G G A T C T A C G T C A G C A G T A T C G T A G C C T G A G T C A
G C A T A C T G C G A T A G T C A C T G A C T G A C G T A C T G T A C G C T A G A C G T

AT3G51470(DBP)/col-AT3G51470-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TVCGGTGCAM-
TTWHGGTGCACC
 A C G T A G C T T A C G G A T C T A C G T C A G C A G T A T C G T A G C C T G A G T C A A C G T
G C A T C A G T C G T A G C T A A T C G T C A G C G A T T C A G A G T C C G T A A G T C G T A C

ZC3H10(Znf)/Homo_sapiens-RNCMPT00085-PBM/HughesRNA

Match Rank:9
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TVCGGTGCAM
-GCGCTGC--
 A G C T T A C G G A T C T A C G T C A G C A G T A T C G T A G C C T G A G T C A
A C G T A C T G A G T C A C T G A G T C A C G T A T C G A T G C A C G T A C G T

AFT1/MA0269.1/Jaspar

Match Rank:10
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TVCGGTGCAM-------
CNANNCGGGTGCAATATNNNA
 A C G T A C G T A C G T A C G T A G C T T A C G G A T C T A C G T C A G C A G T A T C G T A G C C T G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C T G A C C G T A G C T A A C G T A T G C C T A G C A T G T C A G G A C T A T C G G A T C T C G A G T C A G C A T G T C A C A G T T A C G G A C T T C G A T G C A