Information for 6-ATGATGAG (Motif 20)

C T G A G C A T A C T G C T G A G C A T C T A G G T C A A C T G
Reverse Opposite:
T G A C A C G T G A T C C G T A A G C T G T A C C G T A G A C T
p-value:1e-9
log p-value:-2.284e+01
Information Content per bp:1.785
Number of Target Sequences with motif589.0
Percentage of Target Sequences with motif21.69%
Number of Background Sequences with motif7901.6
Percentage of Background Sequences with motif16.97%
Average Position of motif in Targets99.5 +/- 56.2bp
Average Position of motif in Background99.4 +/- 61.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AGL42/MA1201.1/Jaspar

Match Rank:1
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-ATGATGAG
GATGATG--
 A C G T C T G A G C A T A C T G C T G A G C A T C T A G G T C A A C T G
C T A G C G T A A C G T A C T G C T G A A C G T A C T G A C G T A C G T

ZML2(C2C2gata)/col-ZML2-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-ATGATGAG-
GATGATGATG
 A C G T C T G A G C A T A C T G C T G A G C A T C T A G G T C A A C T G A C G T
C T A G C T G A C G A T T C A G C T G A C A G T A T C G C T G A C A G T A T C G

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:3
Score:0.76
Offset:0
Orientation:forward strand
Alignment:ATGATGAG--
ATAATGAGGT
 C T G A G C A T A C T G C T G A G C A T C T A G G T C A A C T G A C G T A C G T
C T G A G A C T T C G A C G T A A C G T A C T G G C T A A C T G T A C G C G A T

elt-2/MA1701.1/Jaspar

Match Rank:4
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:ATGATGAG--
NTGATAAGAA
 C T G A G C A T A C T G C T G A G C A T C T A G G T C A A C T G A C G T A C G T
A G T C G C A T C A T G C T G A A C G T C G T A T C G A A C T G T C G A C T G A

ELT-3(Gata)/cElegans-L1-ELT3-ChIP-Seq(modEncode)/Homer

Match Rank:5
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-ATGATGAG-
AWTGATAAGA
 A C G T C T G A G C A T A C T G C T G A G C A T C T A G G T C A A C T G A C G T
C G T A C G T A G C A T A C T G C G T A A G C T C T G A C G T A T A C G C T G A

RIN(RRM)/Drosophila_melanogaster-RNCMPT00138-PBM/HughesRNA

Match Rank:6
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--ATGATGAG
AGATGATG--
 A C G T A C G T C T G A G C A T A C T G C T G A G C A T C T A G G T C A A C T G
C T G A C T A G C G T A A C G T A C T G C T G A G C A T C T A G A C G T A C G T

skn-1/MA0547.1/Jaspar

Match Rank:7
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---ATGATGAG----
AAAATGATGACAATT
 A C G T A C G T A C G T C T G A G C A T A C T G C T G A G C A T C T A G G T C A A C T G A C G T A C G T A C G T A C G T
T C G A C T G A C T G A C G T A G A C T A T C G G T C A C G A T A C T G C G T A G A T C C G T A C G T A C G A T C G A T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:8
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----ATGATGAG-----
AAACATAATGAGGTTGC
 A C G T A C G T A C G T A C G T C T G A G C A T A C T G C T G A G C A T C T A G G T C A A C T G A C G T A C G T A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

RBM47(RRM)/Gallus_gallus-RNCMPT00279-PBM/HughesRNA

Match Rank:9
Score:0.74
Offset:2
Orientation:forward strand
Alignment:ATGATGAG-
--GATGATN
 C T G A G C A T A C T G C T G A G C A T C T A G G T C A A C T G A C G T
A C G T A C G T A C T G C G T A A C G T A T C G C G T A C G A T C G A T

CRC(C2C2YABBY)/col-CRC-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-ATGATGAG
TATSATWA-
 A C G T C T G A G C A T A C T G C T G A G C A T C T A G G T C A A C T G
C G A T G T C A A C G T A T C G C G T A A C G T C G T A T C G A A C G T