Information for 6-CGGTGGCTCA (Motif 18)

A G T C T A C G T A C G G C A T A C T G C T A G A T G C A C G T T G A C G C T A
Reverse Opposite:
C G A T A C T G T G C A T A C G G A T C T G A C C G T A A T G C A T G C T C A G
p-value:1e-10
log p-value:-2.324e+01
Information Content per bp:1.673
Number of Target Sequences with motif174.0
Percentage of Target Sequences with motif6.41%
Number of Background Sequences with motif1781.3
Percentage of Background Sequences with motif3.82%
Average Position of motif in Targets96.0 +/- 46.7bp
Average Position of motif in Background98.2 +/- 59.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOSL2/MA0478.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CGGTGGCTCA-
GGATGACTCAT
 A G T C T A C G T A C G G C A T A C T G C T A G A T G C A C G T T G A C G C T A A C G T
A C T G T C A G C T G A A C G T A C T G T C G A A T G C A C G T G T A C C G T A A C G T

fos-1/MA1448.1/Jaspar

Match Rank:2
Score:0.72
Offset:3
Orientation:forward strand
Alignment:CGGTGGCTCA
---TGACTCA
 A G T C T A C G T A C G G C A T A C T G C T A G A T G C A C G T T G A C G C T A
A C G T A C G T A C G T A C G T A C T G C G T A A G T C A C G T A G T C C G T A

GCN4(MacIsaac)/Yeast

Match Rank:3
Score:0.71
Offset:2
Orientation:forward strand
Alignment:CGGTGGCTCA
--ATGACTCA
 A G T C T A C G T A C G G C A T A C T G C T A G A T G C A C G T T G A C G C T A
A C G T A C G T T C G A A G C T A T C G C T G A A T G C G C A T G T A C C G T A

FOS::JUND/MA1141.1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CGGTGGCTCA---
NNATGACTCATNN
 A G T C T A C G T A C G G C A T A C T G C T A G A T G C A C G T T G A C G C T A A C G T A C G T A C G T
A G T C A C T G T C G A A C G T A C T G C G T A A G T C C A G T G T A C C T G A A G C T G T A C T G A C

GCN4/GCN4_SM/121-GCN4(Harbison)/Yeast

Match Rank:5
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CGGTGGCTCA
---TGACTCA
 A G T C T A C G T A C G G C A T A C T G C T A G A T G C A C G T T G A C G C T A
A C G T A C G T A C G T G C A T A C T G C G T A A T G C G A C T T G A C C G T A

Smad2::Smad3/MA1622.1/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CGGTGGCTCA---
ATGATGACTCATAA
 A C G T A G T C T A C G T A C G G C A T A C T G C T A G A T G C A C G T T G A C G C T A A C G T A C G T A C G T
C T G A G A C T C A T G T C G A G C A T C A T G C G T A A T G C C G A T G T A C G C T A A G C T G C T A T G C A

FOSL1::JUN/MA1128.1/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CGGTGGCTCA---
TGATGACTCATCC
 A G T C T A C G T A C G G C A T A C T G C T A G A T G C A C G T T G A C G C T A A C G T A C G T A C G T
A C G T C A T G T C G A A G C T C A T G C G T A A G T C C A G T G T A C C T G A A G C T G T A C T G A C

RPN4(MacIsaac)/Yeast

Match Rank:8
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CGGTGGCTCA-
CGGTGGCAAAA
 A G T C T A C G T A C G G C A T A C T G C T A G A T G C A C G T T G A C G C T A A C G T
T A G C C T A G A T C G A G C T C T A G A T C G G T A C C T G A C G T A T G C A G C T A

CRZ1/MA0285.1/Jaspar

Match Rank:9
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CGGTGGCTCA-
--GTGGCTNNG
 A G T C T A C G T A C G G C A T A C T G C T A G A T G C A C G T T G A C G C T A A C G T
A C G T A C G T T A C G C A G T A C T G A C T G A G T C A C G T A C G T C G T A A C T G

FOS::JUN/MA0099.3/Jaspar

Match Rank:10
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CGGTGGCTCA-
-NATGACTCAT
 A G T C T A C G T A C G G C A T A C T G C T A G A T G C A C G T T G A C G C T A A C G T
A C G T A C T G T C G A C G A T C A T G C G T A A T G C C A G T G T A C C T G A A G C T