Information for 13-GGAACACCATCT (Motif 16)

C A T G C T A G G T C A C G T A T A G C G C T A A G T C T A G C C G T A C G A T G T A C G C A T
Reverse Opposite:
C G T A C A T G G C T A G C A T A T C G T C A G C G A T A T C G G C A T C A G T G A T C G T A C
p-value:1e-10
log p-value:-2.386e+01
Information Content per bp:1.701
Number of Target Sequences with motif64.0
Percentage of Target Sequences with motif2.36%
Number of Background Sequences with motif430.3
Percentage of Background Sequences with motif0.92%
Average Position of motif in Targets108.6 +/- 56.3bp
Average Position of motif in Background100.0 +/- 54.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YBX1(CSD)/Homo_sapiens-RNCMPT00116-PBM/HughesRNA

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GGAACACCATCT
--AACATCA---
 C A T G C T A G G T C A C G T A T A G C G C T A A G T C T A G C C G T A C G A T G T A C G C A T
A C G T A C G T C G T A G T C A A G T C C G T A A G C T A G T C C T G A A C G T A C G T A C G T

YBX1(CSD)/Homo_sapiens-RNCMPT00083-PBM/HughesRNA

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GGAACACCATCT
--AACATCA---
 C A T G C T A G G T C A C G T A T A G C G C T A A G T C T A G C C G T A C G A T G T A C G C A T
A C G T A C G T C G T A G T C A A G T C C G T A G A C T A G T C C G T A A C G T A C G T A C G T

AGL42/MA1201.1/Jaspar

Match Rank:3
Score:0.66
Offset:4
Orientation:forward strand
Alignment:GGAACACCATCT
----CATCATC-
 C A T G C T A G G T C A C G T A T A G C G C T A A G T C T A G C C G T A C G A T G T A C G C A T
A C G T A C G T A C G T A C G T A G T C C G T A A G C T A G T C C G T A A C G T G A T C A C G T

BRU-3(RRM)/Drosophila_melanogaster-RNCMPT00122-PBM/HughesRNA

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GGAACACCATCT
---ACACCAC--
 C A T G C T A G G T C A C G T A T A G C G C T A A G T C T A G C C G T A C G A T G T A C G C A T
A C G T A C G T A C G T G T C A A G T C G T C A G T A C G T A C G T C A G T A C A C G T A C G T

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:5
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GGAACACCATCT-----
----NNCCATCTGTNNN
 C A T G C T A G G T C A C G T A T A G C G C T A A G T C T A G C C G T A C G A T G T A C G C A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C T G A A C G T T G A C A G C T A T C G A C G T A G C T G A T C G A T C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GGAACACCATCT---
-----ACCATCTGTT
 C A T G C T A G G T C A C G T A T A G C G C T A A G T C T A G C C G T A C G A T G T A C G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

YBX2(CSD)/Homo_sapiens-RNCMPT00084-PBM/HughesRNA

Match Rank:7
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GGAACACCATCT
--AACAACN---
 C A T G C T A G G T C A C G T A T A G C G C T A A G T C T A G C C G T A C G A T G T A C G C A T
A C G T A C G T C T G A C T G A A T G C C G T A C G T A A G T C C G T A A C G T A C G T A C G T

NEUROD1/MA1109.1/Jaspar

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GGAACACCATCT----
---NNNCCATCTGTNN
 C A T G C T A G G T C A C G T A T A G C G C T A A G T C T A G C C G T A C G A T G T A C G C A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:9
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GGAACACCATCT---
---CGACCATCTGTT
 C A T G C T A G G T C A C G T A T A G C G C T A A G T C T A G C C G T A C G A T G T A C G C A T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C T A C G C T G A G T A C A T G C C G T A A C G T G T A C A C G T A C T G A C G T G A C T

lin-14/MA0261.1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GGAACACCATCT
-GAACAC-----
 C A T G C T A G G T C A C G T A T A G C G C T A A G T C T A G C C G T A C G A T G T A C G C A T
A C G T A C T G C G T A C G T A A G T C C T G A A G T C A C G T A C G T A C G T A C G T A C G T