Motif 15

Information for 12-TCTAGTTCAACG (Motif 15)

Reverse Opposite:

p-value:	1e-10
log p-value:	-2.493e+01
Information Content per bp:	1.705
Number of Target Sequences with motif	58.0
Percentage of Target Sequences with motif	2.14%
Number of Background Sequences with motif	358.2
Percentage of Background Sequences with motif	0.77%
Average Position of motif in Targets	92.1 +/- 52.2bp
Average Position of motif in Background	102.6 +/- 57.9bp
Strand Bias (log2 ratio + to - strand density)	-0.4
Multiplicity (# of sites on avg that occur together)	1.02
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

ct/MA0218.1/Jaspar

Match Rank:	1
Score:	0.70
Offset:	4
Orientation:	reverse strand
Alignment:	TCTAGTTCAACG ----GTTCAA--

Ct/dmmpmm(Noyes_hd)/fly

Match Rank:	2
Score:	0.68
Offset:	2
Orientation:	reverse strand
Alignment:	TCTAGTTCAACG --NNGTTCAAGN

WRKY12/MA1075.1/Jaspar

Match Rank:	3
Score:	0.67
Offset:	4
Orientation:	reverse strand
Alignment:	TCTAGTTCAACG ----GGTCAACG

WRKY38/MA1084.1/Jaspar

Match Rank:	4
Score:	0.66
Offset:	4
Orientation:	reverse strand
Alignment:	TCTAGTTCAACG ----GGTCAACG

WRKY15/MA1076.2/Jaspar

Match Rank:	5
Score:	0.66
Offset:	-1
Orientation:	forward strand
Alignment:	-TCTAGTTCAACG--- AAAAAAGTCAACGGTT

NR1I3/MA1534.1/Jaspar

Match Rank:	6
Score:	0.66
Offset:	1
Orientation:	reverse strand
Alignment:	TCTAGTTCAACG -AAAGTTCAT--

VDR/MA0693.2/Jaspar

Match Rank:	7
Score:	0.65
Offset:	1
Orientation:	forward strand
Alignment:	TCTAGTTCAACG -TGAGTTCA---

WRKY45/MA1087.1/Jaspar

Match Rank:	8
Score:	0.65
Offset:	4
Orientation:	reverse strand
Alignment:	TCTAGTTCAACG ----GGTCAACG

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:	9
Score:	0.65
Offset:	0
Orientation:	reverse strand
Alignment:	TCTAGTTCAACG CAAAGKTCAA--

NR6A1/MA1541.1/Jaspar

Match Rank:	10
Score:	0.64
Offset:	-1
Orientation:	forward strand
Alignment:	-TCTAGTTCAACG---- GTCAAGTTCAAGGTCAA