Information for 11-CTCCAGCTCCGG (Motif 14)

A G T C C A G T T A G C G T A C T C G A A C T G A T G C C G A T A G T C A G T C C T A G C A T G
Reverse Opposite:
G T A C G A T C T C A G T C A G G C T A T A C G T G A C A G C T C A T G A T C G G T C A T C A G
p-value:1e-10
log p-value:-2.519e+01
Information Content per bp:1.703
Number of Target Sequences with motif64.0
Percentage of Target Sequences with motif2.36%
Number of Background Sequences with motif416.6
Percentage of Background Sequences with motif0.89%
Average Position of motif in Targets103.3 +/- 53.9bp
Average Position of motif in Background98.4 +/- 57.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CTCCAGCTCCGG
GGCTCYAKCAYC--
 A C G T A C G T A G T C C A G T T A G C G T A C T C G A A C T G A T G C C G A T A G T C A G T C C T A G C A T G
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.69
Offset:5
Orientation:forward strand
Alignment:CTCCAGCTCCGG
-----GCTCCG-
 A G T C C A G T T A G C G T A C T C G A A C T G A T G C C G A T A G T C A G T C C T A G C A T G
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T

ZNF135/MA1587.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTCCAGCTCCGG-
CCTCGACCTCCTGA
 A C G T A G T C C A G T T A G C G T A C T C G A A C T G A T G C C G A T A G T C A G T C C T A G C A T G A C G T
A G T C A G T C A G C T A G T C T C A G C T G A T A G C A G T C A G C T A T G C G A T C G A C T T C A G C T G A

YLR278C/MA0430.1/Jaspar

Match Rank:4
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CTCCAGCTCCGG
----AACTCCGG
 A G T C C A G T T A G C G T A C T C G A A C T G A T G C C G A T A G T C A G T C C T A G C A T G
A C G T A C G T A C G T A C G T C G T A G C T A A T G C A G C T A G T C A G T C A C T G C T A G

Pp_0237(RRM)/Physcomitrella_patens-RNCMPT00237-PBM/HughesRNA

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTCCAGCTCCGG
ACTCCATC-----
 A C G T A G T C C A G T T A G C G T A C T C G A A C T G A T G C C G A T A G T C A G T C C T A G C A T G
C G T A G A T C A C G T A G T C A G T C C G T A C G A T G T A C A C G T A C G T A C G T A C G T A C G T

SIP4/MA0380.1/Jaspar

Match Rank:6
Score:0.62
Offset:6
Orientation:forward strand
Alignment:CTCCAGCTCCGG-
------CTCCGGA
 A G T C C A G T T A G C G T A C T C G A A C T G A T G C C G A T A G T C A G T C C T A G C A T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T A G T C A G T C A C T G C T A G T C G A

ASH1(MacIsaac)/Yeast

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTCCAGCTCCGG
--CCCGATCCGG
 A G T C C A G T T A G C G T A C T C G A A C T G A T G C C G A T A G T C A G T C C T A G C A T G
A C G T A C G T G T A C T G A C G A T C C T A G T C G A A G C T A G T C A G T C C T A G T C A G

LEU3/MA0324.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTCCAGCTCCGG
--CCGTTACCGG
 A G T C C A G T T A G C G T A C T C G A A C T G A T G C C G A T A G T C A G T C C T A G C A T G
A C G T A C G T A G T C A G T C A C T G C A G T G A C T C G T A A T G C A G T C A C T G A T C G

LEU3/LEU3_SM/47-LEU3(Harbison)/Yeast

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTCCAGCTCCGG
--CCGGTACCGG
 A G T C C A G T T A G C G T A C T C G A A C T G A T G C C G A T A G T C A G T C C T A G C A T G
A C G T A C G T A T G C A T G C A C T G A C T G C G A T G C T A T G A C T G A C T A C G A T C G

CAT8/MA0280.1/Jaspar

Match Rank:10
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:CTCCAGCTCCGG
------NTCCGG
 A G T C C A G T T A G C G T A C T C G A A C T G A T G C C G A T A G T C A G T C C T A G C A T G
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A G C T A G T C A G T C A C T G A C T G