Information for 8-MCCTYTTTSTTC (Motif 11)

G T A C A G T C G A T C G C A T G A T C A G C T A C G T A C G T A T G C A G C T C G A T A G T C
Reverse Opposite:
T C A G G C T A T C G A T A C G T G C A T G C A T C G A C T A G C G T A C T A G T C A G C A T G
p-value:1e-11
log p-value:-2.604e+01
Information Content per bp:1.661
Number of Target Sequences with motif113.0
Percentage of Target Sequences with motif4.16%
Number of Background Sequences with motif953.3
Percentage of Background Sequences with motif2.05%
Average Position of motif in Targets89.4 +/- 53.8bp
Average Position of motif in Background100.6 +/- 55.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TRA2(RRM)/Drosophila_melanogaster-RNCMPT00078-PBM/HughesRNA

Match Rank:1
Score:0.72
Offset:5
Orientation:reverse strand
Alignment:MCCTYTTTSTTC
-----CTTCTTC
 G T A C A G T C G A T C G C A T G A T C A G C T A C G T A C G T A T G C A G C T C G A T A G T C
A C G T A C G T A C G T A C G T A C G T T A G C A C G T A C G T A T G C A G C T A C G T A G T C

dof42(C2C2dof)/col-dof42-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:MCCTYTTTSTTC
GCCTTTTT----
 G T A C A G T C G A T C G C A T G A T C A G C T A C G T A C G T A T G C A G C T C G A T A G T C
C T A G A G T C A G T C A C G T A C G T A C G T C G A T G C A T A C G T A C G T A C G T A C G T

dof4.2/MA1273.1/Jaspar

Match Rank:3
Score:0.70
Offset:-6
Orientation:reverse strand
Alignment:------MCCTYTTTSTTC-
TTTTTTGCCTTTTTNNTTT
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A G T C G A T C G C A T G A T C A G C T A C G T A C G T A T G C A G C T C G A T A G T C A C G T
G A C T G A C T G C A T C G A T G C A T G C A T C T A G G A T C A G T C A C G T A C G T A C G T C G A T A G C T A G C T G A C T G C A T C G A T G C A T

MAC1/Literature(Harbison)/Yeast

Match Rank:4
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:MCCTYTTTSTTC
-----TTTGCTC
 G T A C A G T C G A T C G C A T G A T C A G C T A C G T A C G T A T G C A G C T C G A T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C

AT2G28810(C2C2dof)/colamp-AT2G28810-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-MCCTYTTTSTTC
TWACTTTTTB---
 A C G T G T A C A G T C G A T C G C A T G A T C A G C T A C G T A C G T A T G C A G C T C G A T A G T C
A G C T G C A T T G C A A G T C A G C T A C G T A C G T C G A T A G C T A T G C A C G T A C G T A C G T

CPEB2(RRM)/Homo_sapiens-RNCMPT00012-PBM/HughesRNA

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:MCCTYTTTSTTC
-CTTTTTT----
 G T A C A G T C G A T C G C A T G A T C A G C T A C G T A C G T A T G C A G C T C G A T A G T C
A C G T A G T C G C A T G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-MCCTYTTTSTTC----
TNNTCCTTTGTTCTNNT
 A C G T G T A C A G T C G A T C G C A T G A T C A G C T A C G T A C G T A T G C A G C T C G A T A G T C A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

At3g45610(C2C2dof)/col-At3g45610-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-MCCTYTTTSTTC
TWACTTTTTS---
 A C G T G T A C A G T C G A T C G C A T G A T C A G C T A C G T A C G T A T G C A G C T C G A T A G T C
G A C T G C T A T G C A A G T C A C G T A C G T A C G T C G A T A C G T T A C G A C G T A C G T A C G T

AT3G12130(C3H)/colamp-AT3G12130-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-MCCTYTTTSTTC
TMACTTTTTV---
 A C G T G T A C A G T C G A T C G C A T G A T C A G C T A C G T A C G T A T G C A G C T C G A T A G T C
A G C T G T C A T G C A A G T C A C G T A C G T A C G T C G A T G A C T T A C G A C G T A C G T A C G T

Tb_0253(RRM)/Trypanosoma_brucei-RNCMPT00253-PBM/HughesRNA

Match Rank:10
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:MCCTYTTTSTTC
---TTTTTCT--
 G T A C A G T C G A T C G C A T G A T C A G C T A C G T A C G T A T G C A G C T C G A T A G T C
A C G T A C G T A C G T A G C T A G C T A C G T A G C T A C G T A G T C A C G T A C G T A C G T