Information for 1-ACCGTCAAGA (Motif 1)

T C G A T A G C A T G C C T A G C G A T G T A C G T C A T G C A T C A G C G T A
Reverse Opposite:
G C A T A G T C A C G T C A G T C A T G G C T A G A T C T A C G A T C G A G C T
p-value:1e-17
log p-value:-3.956e+01
Information Content per bp:1.495
Number of Target Sequences with motif612.0
Percentage of Target Sequences with motif22.54%
Number of Background Sequences with motif7547.2
Percentage of Background Sequences with motif16.20%
Average Position of motif in Targets98.6 +/- 55.4bp
Average Position of motif in Background98.8 +/- 58.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MATR3(RRM)/Homo_sapiens-RNCMPT00037-PBM/HughesRNA

Match Rank:1
Score:0.74
Offset:5
Orientation:reverse strand
Alignment:ACCGTCAAGA--
-----CAAGATT
 T C G A T A G C A T G C C T A G C G A T G T A C G T C A T G C A T C A G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G C G T A C G A T A C G T

WRKY18/MA1077.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:ACCGTCAAGA
ATGGTCAACG
 T C G A T A G C A T G C C T A G C G A T G T A C G T C A T G C A T C A G C G T A
G T C A G A C T T C A G A C T G A C G T G A T C G T C A C G T A T A G C T A C G

WRKY63/MA1092.1/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:ACCGTCAAGA
-CGGTCAAC-
 T C G A T A G C A T G C C T A G C G A T G T A C G T C A T G C A T C A G C G T A
A C G T G A T C C T A G A C T G A C G T A G T C C G T A C G T A A T G C A C G T

SNRNP70(RRM)/Homo_sapiens-RNCMPT00070-PBM/HughesRNA

Match Rank:4
Score:0.71
Offset:2
Orientation:forward strand
Alignment:ACCGTCAAGA
--GATCAAG-
 T C G A T A G C A T G C C T A G C G A T G T A C G T C A T G C A T C A G C G T A
A C G T A C G T C T A G C G T A A C G T A G T C C G T A C G T A C T A G A C G T

WRKY18(WRKY)/col-WRKY18-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----ACCGTCAAGA-
NNNNNWRGTCAANNN
 A C G T A C G T A C G T A C G T T C G A T A G C A T G C C T A G C G A T G T A C G T C A T G C A T C A G C G T A A C G T
C G A T C G T A C G T A G C T A G C T A C G A T C T G A A C T G A C G T A G T C C G T A C G T A T C G A C T A G G C A T

exd/MA0222.1/Jaspar

Match Rank:6
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:ACCGTCAAGA
--TGTCAAAN
 T C G A T A G C A T G C C T A G C G A T G T A C G T C A T G C A T C A G C G T A
A C G T A C G T A G C T C T A G A C G T A G T C C G T A C G T A G T C A C G T A

WRKY71(WRKY)/col-WRKY71-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ACCGTCAAGA
WWRGTCAAMG
 T C G A T A G C A T G C C T A G C G A T G T A C G T C A T G C A T C A G C G T A
G C T A C G T A C T G A A C T G A C G T A G T C C G T A C G T A G T A C T A C G

NAC078/MA1677.1/Jaspar

Match Rank:8
Score:0.69
Offset:3
Orientation:forward strand
Alignment:ACCGTCAAGA-----
---AACAAGAAACAT
 T C G A T A G C A T G C C T A G C G A T G T A C G T C A T G C A T C A G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C T G A A G T C C G T A G T C A A C T G G C T A G C T A C G T A G A T C G T C A C G A T

WRKY25/MA1081.1/Jaspar

Match Rank:9
Score:0.69
Offset:1
Orientation:forward strand
Alignment:ACCGTCAAGA
-CGGTCAAC-
 T C G A T A G C A T G C C T A G C G A T G T A C G T C A T G C A T C A G C G T A
A C G T A G T C C T A G A C T G A C G T A G T C C G T A C T G A G T A C A C G T

SNRNP70K(RRM)/Drosophila_melanogaster-RNCMPT00143-PBM/HughesRNA

Match Rank:10
Score:0.68
Offset:2
Orientation:forward strand
Alignment:ACCGTCAAGA
--GATCAAGA
 T C G A T A G C A T G C C T A G C G A T G T A C G T C A T G C A T C A G C G T A
A C G T A C G T C T A G C G T A A C G T A G T C C G T A G C T A A C T G G T C A