Information for 8-GTCTGGGT (Motif 6)

C A T G A C G T A G T C A C G T A C T G A C T G C T A G A C G T
Reverse Opposite:
C G T A A G T C A G T C A G T C C G T A A C T G C G T A G T A C
p-value:1e-19
log p-value:-4.461e+01
Information Content per bp:1.908
Number of Target Sequences with motif454.0
Percentage of Target Sequences with motif3.81%
Number of Background Sequences with motif883.5
Percentage of Background Sequences with motif2.42%
Average Position of motif in Targets101.3 +/- 54.8bp
Average Position of motif in Background102.1 +/- 59.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NCU02182/MA1434.1/Jaspar

Match Rank:1
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:GTCTGGGT-
--NTGGGTA
 C A T G A C G T A G T C A C G T A C T G A C T G C T A G A C G T A C G T
A C G T A C G T T C A G A C G T A C T G A C T G A C T G A C G T C G T A

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.79
Offset:-6
Orientation:reverse strand
Alignment:------GTCTGGGT---
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C G T A G T C A C G T A C T G A C T G C T A G A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GTCTGGGT-
GGTCTGGCAT
 A C G T C A T G A C G T A G T C A C G T A C T G A C T G C T A G A C G T A C G T
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--GTCTGGGT
CTGTCTGG--
 A C G T A C G T C A T G A C G T A G T C A C G T A C T G A C T G C T A G A C G T
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----GTCTGGGT
VBSYGTCTGG--
 A C G T A C G T A C G T A C G T C A T G A C G T A G T C A C G T A C T G A C T G C T A G A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

sma-4/MA0925.1/Jaspar

Match Rank:6
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---GTCTGGGT
AGTGTCTGGAC
 A C G T A C G T A C G T C A T G A C G T A G T C A C G T A C T G A C T G C T A G A C G T
C G T A T C A G A C G T A C T G C G A T A G T C A C G T C T A G A C T G T C G A A G T C

RAP1(MacIsaac)/Yeast

Match Rank:7
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--GTCTGGGT--
GTGTATGGGTGT
 A C G T A C G T C A T G A C G T A G T C A C G T A C T G A C T G C T A G A C G T A C G T A C G T
C T A G A C G T C A T G G A C T T C G A G A C T T C A G A T C G T C A G A G C T A C T G A G C T

RAP1/MA0359.1/Jaspar

Match Rank:8
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GTCTGGGT-
TGTATGGGTG
 A C G T C A T G A C G T A G T C A C G T A C T G A C T G C T A G A C G T A C G T
C A G T C A T G G A C T C G T A G A C T C T A G A C T G C T A G C G A T A C T G

Smad4/MA1153.1/Jaspar

Match Rank:9
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GTCTGGGT
TGTCTAGA-
 A C G T C A T G A C G T A G T C A C G T A C T G A C T G C T A G A C G T
G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T

CG14718(RRM)/Drosophila_melanogaster-RNCMPT00006-PBM/HughesRNA

Match Rank:10
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GTCTGGGT
NCATCTGG--
 A C G T A C G T C A T G A C G T A G T C A C G T A C T G A C T G C T A G A C G T
A T C G T A G C G T C A A C G T A G T C A C G T A C T G A C T G A C G T A C G T