Information for 19-TCGAACCTCA (Motif 33)

A C G T A G T C A C T G C G T A C G T A A G T C A G T C A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C T G A C T G A C G T A C G T A G T C A C T G C G T A
p-value:1e-4
log p-value:-9.850e+00
Information Content per bp:1.530
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.08%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets113.3 +/- 63.4bp
Average Position of motif in Background75.1 +/- 12.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OPI1/Literature(Harbison)/Yeast

Match Rank:1
Score:0.80
Offset:0
Orientation:forward strand
Alignment:TCGAACCTCA
TCGAACC---
 A C G T A G T C A C T G C G T A C G T A A G T C A G T C A C G T A G T C C G T A
A C G T A G T C A C T G C G T A C G T A A G C T A G T C A C G T A C G T A C G T

RUNX3/MA0684.2/Jaspar

Match Rank:2
Score:0.77
Offset:1
Orientation:forward strand
Alignment:TCGAACCTCA---
-AAAACCTCAAAT
 A C G T A G T C A C T G C G T A C G T A A G T C A G T C A C G T A G T C C G T A A C G T A C G T A C G T
A C G T C G T A G C T A T C G A C T G A G A T C T G A C C G A T T G A C G C T A C T G A G C T A G A C T

OPI1(MacIsaac)/Yeast

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TCGAACCTCA
-CGAACCG--
 A C G T A G T C A C T G C G T A C G T A A G T C A G T C A C G T A G T C C G T A
A C G T A T G C A C T G G T C A C G T A G A T C G T A C T C A G A C G T A C G T

OPI1/MA0349.1/Jaspar

Match Rank:4
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TCGAACCTCA
-CGAACCG--
 A C G T A G T C A C T G C G T A C G T A A G T C A G T C A C G T A G T C C G T A
A C G T A T G C A C T G G T C A C G T A A G T C A G T C T C A G A C G T A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TCGAACCTCA
CAAAATCGAAACTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A C G T A A G T C A G T C A C G T A G T C C G T A
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A

YER051W(MacIsaac)/Yeast

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TCGAACCTCA
TTCGAA-----
 A C G T A C G T A G T C A C T G C G T A C G T A A G T C A G T C A C G T A G T C C G T A
C G A T A C G T G T A C A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TCGAACCTCA-
-NAAACCACAG
 A C G T A G T C A C T G C G T A C G T A A G T C A G T C A C G T A G T C C G T A A C G T
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX2/MA0511.2/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TCGAACCTCA-
--AAACCGCAA
 A C G T A G T C A C T G C G T A C G T A A G T C A G T C A C G T A G T C C G T A A C G T
A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TCGAACCTCA--
--AAACCACANN
 A C G T A G T C A C T G C G T A C G T A A G T C A G T C A C G T A G T C C G T A A C G T A C G T
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

An_0265(KH)/Aspergillus_nidulans-RNCMPT00265-PBM/HughesRNA

Match Rank:10
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TCGAACCTCA
---NACCTAA
 A C G T A G T C A C T G C G T A C G T A A G T C A G T C A C G T A G T C C G T A
A C G T A C G T A C G T C T G A G T C A A G T C G T A C A G C T G T C A C G T A