Information for 3-CVAAATCGAA (Motif 3)

G T A C T A G C C T G A G T C A G C T A C G A T T A G C C T A G T C G A G C T A
Reverse Opposite:
C G A T A G C T G A T C A T C G G C T A C G A T C A G T G A C T A T C G C A T G
p-value:1e-26
log p-value:-6.022e+01
Information Content per bp:1.558
Number of Target Sequences with motif1596.0
Percentage of Target Sequences with motif13.38%
Number of Background Sequences with motif3758.4
Percentage of Background Sequences with motif10.29%
Average Position of motif in Targets98.7 +/- 56.0bp
Average Position of motif in Background100.0 +/- 68.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

onecut/MA0235.1/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CVAAATCGAA
--AAATCAA-
 G T A C T A G C C T G A G T C A G C T A C G A T T A G C C T A G T C G A G C T A
A C G T A C G T G C T A C G T A C G T A A C G T A G T C C G T A C T G A A C G T

pan/dmmpmm(Bigfoot)/fly

Match Rank:2
Score:0.70
Offset:4
Orientation:forward strand
Alignment:CVAAATCGAA
----ATCAAA
 G T A C T A G C C T G A G T C A G C T A C G A T T A G C C T A G T C G A G C T A
A C G T A C G T A C G T A C G T C G T A G C A T G T A C C G T A G C T A C G T A

onecut/dmmpmm(Noyes_hd)/fly

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CVAAATCGAA-
-CAAATCAANN
 G T A C T A G C C T G A G T C A G C T A C G A T T A G C C T A G T C G A G C T A A C G T
A C G T A G T C G C T A C G T A C G T A A C G T A G T C C G T A C T G A A C G T C T A G

SPT23/SPT23_YPD/[](Harbison)/Yeast

Match Rank:4
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CVAAATCGAA
-GAAATCAA-
 G T A C T A G C C T G A G T C A G C T A C G A T T A G C C T A G T C G A G C T A
A C G T C T A G C T G A C T G A C G T A G A C T A T G C T G C A C T G A A C G T

SPT23(MacIsaac)/Yeast

Match Rank:5
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CVAAATCGAA
-GAAATCAA-
 G T A C T A G C C T G A G T C A G C T A C G A T T A G C C T A G T C G A G C T A
A C G T C T A G C T G A C T G A C G T A G A C T A T G C T G C A C T G A A C G T

AT2G15740(C2H2)/col-AT2G15740-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CVAAATCGAA-
DHNDWATCGATD
 A C G T G T A C T A G C C T G A G T C A G C T A C G A T T A G C C T A G T C G A G C T A A C G T
C G A T G A T C T A C G C T G A G C T A C G T A G C A T A G T C C T A G C G T A G C A T C G A T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CVAAATCGAA-----
CAAAATCGAAACTAA
 G T A C T A G C C T G A G T C A G C T A C G A T T A G C C T A G T C G A G C T A A C G T A C G T A C G T A C G T A C G T
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A

SPT23/MA0388.1/Jaspar

Match Rank:8
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CVAAATCGAA
-GAAATCAA-
 G T A C T A G C C T G A G T C A G C T A C G A T T A G C C T A G T C G A G C T A
A C G T C T A G C G T A C T G A C G T A G A C T A T G C T G C A C T G A A C G T

IRF7/MA0772.1/Jaspar

Match Rank:9
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CVAAATCGAA---
ACGAAAGCGAAAGT
 A C G T G T A C T A G C C T G A G T C A G C T A C G A T T A G C C T A G T C G A G C T A A C G T A C G T A C G T
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

AT1G20910(ARID)/col-AT1G20910-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CVAAATCGAA-
-THAATTRAWN
 G T A C T A G C C T G A G T C A G C T A C G A T T A G C C T A G T C G A G C T A A C G T
A C G T A G C T G C T A C T G A C G T A A C G T A G C T C T A G C T G A C G T A A G C T