Information for 16-TGTTGGATTG (Motif 29)

A C G T A C T G A G C T A C G T C T A G A C T G C G T A C G A T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A C G T A G T C A G T C C G T A C T G A A G T C C G T A
p-value:1e-7
log p-value:-1.734e+01
Information Content per bp:1.932
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif65.8
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets108.0 +/- 54.5bp
Average Position of motif in Background111.9 +/- 67.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RBM6(RRM)/Homo_sapiens-RNCMPT00170-PBM/HughesRNA

Match Rank:1
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:TGTTGGATTG
--CTGGATT-
 A C G T A C T G A G C T A C G T C T A G A C T G C G T A C G A T A C G T A C T G
A C G T A C G T A G T C A C G T A C T G A C T G C G T A C G A T C A G T A C G T

HAP3(CCAATHAP3)/col-HAP3-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TGTTGGATTG
TGATGGAW--
 A C G T A C T G A G C T A C G T C T A G A C T G C G T A C G A T A C G T A C T G
A C G T A C T G C G T A A C G T A C T G A C T G C G T A C G T A A C G T A C G T

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGTTGGATTG
TGATKGATGR
 A C G T A C T G A G C T A C G T C T A G A C T G C G T A C G A T A C G T A C T G
C G A T C T A G C G T A G A C T C A G T C T A G C G T A A G C T C A T G C T A G

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGTTGGATTG-
ATGATKGATGRC
 A C G T A C G T A C T G A G C T A C G T C T A G A C T G C G T A C G A T A C G T A C T G A C G T
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

Pp_0237(RRM)/Physcomitrella_patens-RNCMPT00237-PBM/HughesRNA

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGTTGGATTG
-GATGGAGT-
 A C G T A C T G A G C T A C G T C T A G A C T G C G T A C G A T A C G T A C T G
A C G T A C T G C G T A A C G T A C T G A C T G C G T A C T A G A C G T A C G T

TEAD4/MA0809.2/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TGTTGGATTG---
-NCTGGAATGTNN
 A C G T A C T G A G C T A C G T C T A G A C T G C G T A C G A T A C G T A C T G A C G T A C G T A C G T
A C G T A T G C G A T C C G A T C T A G T C A G G C T A T C G A C G A T A C T G G A C T C T A G C T A G

Foxd3/MA0041.1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TGTTGGATTG
GAATGTTTGTTT-
 A C G T A C G T A C G T A C G T A C T G A G C T A C G T C T A G A C T G C G T A C G A T A C G T A C T G
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T

CBF(- other)/several species/AthaMap

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGTTGGATTG-----
--NNNNATTGNNNNN
 A C G T A C T G A G C T A C G T C T A G A C T G C G T A C G A T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C G T A C G A T C G T A C G T A A C G T A C G T A C T G C A T G G C T A G C T A G C A T G C A T

Dux/MA0611.1/Jaspar

Match Rank:9
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TGTTGGATTG-
---TTGATTGN
 A C G T A C T G A G C T A C G T C T A G A C T G C G T A C G A T A C G T A C T G A C G T
A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TGTTGGATTG---
---TGGAATGYRG
 A C G T A C T G A G C T A C G T C T A G A C T G C G T A C G A T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A C T G A C T G C G T A C G T A A C G T A C T G A G C T T C A G A C T G