Information for 19-WCTCAAACAACA (Motif 26)

C G A T A G T C C G A T G T A C G T C A C G T A C G T A A T G C C G T A C G T A G T A C C G T A
Reverse Opposite:
A C G T A C T G C G A T A C G T A T C G A C G T A C G T A C G T C A T G C G T A A C T G G C T A
p-value:1e-9
log p-value:-2.178e+01
Information Content per bp:1.791
Number of Target Sequences with motif114.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif184.7
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets97.7 +/- 59.3bp
Average Position of motif in Background103.5 +/- 56.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YBX2(CSD)/Homo_sapiens-RNCMPT00084-PBM/HughesRNA

Match Rank:1
Score:0.73
Offset:5
Orientation:forward strand
Alignment:WCTCAAACAACA
-----AACAACN
 C G A T A G T C C G A T G T A C G T C A C G T A C G T A A T G C C G T A C G T A G T A C C G T A
A C G T A C G T A C G T A C G T A C G T C T G A C T G A A T G C C G T A C G T A A G T C C G T A

PB0123.1_Foxl1_2/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--WCTCAAACAACA--
ATATCAAAACAAAACA
 A C G T A C G T C G A T A G T C C G A T G T A C G T C A C G T A C G T A A T G C C G T A C G T A G T A C C G T A A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

YBX1(CSD)/Homo_sapiens-RNCMPT00083-PBM/HughesRNA

Match Rank:3
Score:0.71
Offset:5
Orientation:forward strand
Alignment:WCTCAAACAACA
-----AACATCA
 C G A T A G T C C G A T G T A C G T C A C G T A C G T A A T G C C G T A C G T A G T A C C G T A
A C G T A C G T A C G T A C G T A C G T C G T A G T C A A G T C C G T A G A C T A G T C C G T A

Aef1/dmmpmm(Pollard)/fly

Match Rank:4
Score:0.70
Offset:4
Orientation:forward strand
Alignment:WCTCAAACAACA
----CAACAACA
 C G A T A G T C C G A T G T A C G T C A C G T A C G T A A T G C C G T A C G T A G T A C C G T A
A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C C G T A C G T A A G T C C G T A

PB0093.1_Zfp105_1/Jaspar

Match Rank:5
Score:0.70
Offset:1
Orientation:forward strand
Alignment:WCTCAAACAACA----
-AACAAACAACAAGAG
 C G A T A G T C C G A T G T A C G T C A C G T A C G T A A T G C C G T A C G T A G T A C C G T A A C G T A C G T A C G T A C G T
A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

YBX1(CSD)/Homo_sapiens-RNCMPT00116-PBM/HughesRNA

Match Rank:6
Score:0.69
Offset:5
Orientation:forward strand
Alignment:WCTCAAACAACA
-----AACATCA
 C G A T A G T C C G A T G T A C G T C A C G T A C G T A A T G C C G T A C G T A G T A C C G T A
A C G T A C G T A C G T A C G T A C G T C G T A G T C A A G T C C G T A A G C T A G T C C T G A

HCM1/MA0317.1/Jaspar

Match Rank:7
Score:0.67
Offset:2
Orientation:forward strand
Alignment:WCTCAAACAACA
--ATAAACAA--
 C G A T A G T C C G A T G T A C G T C A C G T A C G T A A T G C C G T A C G T A G T A C C G T A
A C G T A C G T T C G A G C A T G T C A G T C A C G T A G A T C C G T A G T C A A C G T A C G T

Tv_0258(RRM)/Trichomonas_vaginalis-RNCMPT00258-PBM/HughesRNA

Match Rank:8
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:WCTCAAACAACA
--ACAAACA---
 C G A T A G T C C G A T G T A C G T C A C G T A C G T A A T G C C G T A C G T A G T A C C G T A
A C G T A C G T G C T A A G T C G T C A T C G A C G T A G T A C C G T A A C G T A C G T A C G T

Aef1/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.66
Offset:4
Orientation:forward strand
Alignment:WCTCAAACAACA
----CAACAA--
 C G A T A G T C C G A T G T A C G T C A C G T A C G T A A T G C C G T A C G T A G T A C C G T A
A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C C G T A C G T A A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:WCTCAAACAACA---
CAAACAACAACACCT
 C G A T A G T C C G A T G T A C G T C A C G T A C G T A A T G C C G T A C G T A G T A C C G T A A C G T A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T