Information for 13-ACAAATTA (Motif 22)

C G T A A T G C C T G A C G T A C T G A A C G T A C G T C G T A
Reverse Opposite:
C G A T C G T A G T C A A G C T A C G T A G C T A T C G A C G T
p-value:1e-9
log p-value:-2.296e+01
Information Content per bp:1.877
Number of Target Sequences with motif754.0
Percentage of Target Sequences with motif6.32%
Number of Background Sequences with motif1827.7
Percentage of Background Sequences with motif5.00%
Average Position of motif in Targets99.8 +/- 58.3bp
Average Position of motif in Background97.4 +/- 59.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

tll/dmmpmm(Bergman)/fly

Match Rank:1
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:ACAAATTA-
--AAATTAA
 C G T A A T G C C T G A C G T A C T G A A C G T A C G T C G T A A C G T
A C G T A C G T C G T A C G T A C G T A A C G T A C G T C G T A C G T A

Dr/dmmpmm(Noyes_hd)/fly

Match Rank:2
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-ACAAATTA-
GACCAATTAA
 A C G T C G T A A T G C C T G A C G T A C T G A A C G T A C G T C G T A A C G T
T A C G C G T A A T G C A G T C C G T A C G T A A C G T A C G T C G T A A C G T

PH0107.1_Msx2/Jaspar

Match Rank:3
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----ACAAATTA-----
GAAGACCAATTAGCGCT
 A C G T A C G T A C G T A C G T C G T A A T G C C T G A C G T A C T G A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
T C A G T G C A C T G A T A C G C T G A A T G C G A T C C G T A G T C A C G A T G A C T C T G A C A T G G A T C C A T G G A T C A G C T

CG17838(RRM)/Drosophila_melanogaster-RNCMPT00131-PBM/HughesRNA

Match Rank:4
Score:0.77
Offset:1
Orientation:forward strand
Alignment:ACAAATTA
-GAAATTT
 C G T A A T G C C T G A C G T A C T G A A C G T A C G T C G T A
A C G T A T C G C G T A C G T A C G T A C G A T A C G T C A G T

HNRNPR(RRM)/Gallus_gallus-RNCMPT00288-PBM/HughesRNA

Match Rank:5
Score:0.77
Offset:0
Orientation:forward strand
Alignment:ACAAATTA
CCAAATT-
 C G T A A T G C C T G A C G T A C T G A A C G T A C G T C G T A
G T A C G T A C C G T A C G T A C G T A C G A T A G C T A C G T

Nobox/MA0125.1/Jaspar

Match Rank:6
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:ACAAATTA
ACCAATTA
 C G T A A T G C C T G A C G T A C T G A A C G T A C G T C G T A
T C G A A T G C G A T C G T C A G T C A A C G T C G A T C T G A

PH0108.1_Msx3/Jaspar

Match Rank:7
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----ACAAATTA----
CAAAACCAATTAATTT
 A C G T A C G T A C G T A C G T C G T A A T G C C T G A C G T A C T G A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T

PAX4/MA0068.2/Jaspar

Match Rank:8
Score:0.76
Offset:1
Orientation:forward strand
Alignment:ACAAATTA-
-CTAATTAG
 C G T A A T G C C T G A C G T A C T G A A C G T A C G T C G T A A C G T
A C G T A G T C C A G T G C T A C G T A A C G T G C A T G T C A T C A G

GBX1/MA0889.1/Jaspar

Match Rank:9
Score:0.76
Offset:0
Orientation:forward strand
Alignment:ACAAATTA--
ACTAATTAGC
 C G T A A T G C C T G A C G T A C T G A A C G T A C G T C G T A A C G T A C G T
T C G A A T G C G A C T T C G A T G C A G A C T G A C T G C T A T A C G A G T C

NOTO/MA0710.1/Jaspar

Match Rank:10
Score:0.76
Offset:0
Orientation:forward strand
Alignment:ACAAATTA--
GCTAATTAGC
 C G T A A T G C C T G A C G T A C T G A A C G T A C G T C G T A A C G T A C G T
T A C G G A T C G C A T G T C A C G T A A C G T C A G T C T G A T C A G A T G C