Information for 12-CAATTGATCAAT (Motif 20)

G T A C G T C A G C T A G C A T G A C T A C T G G T C A G C A T G T A C C T G A C G T A C G A T
Reverse Opposite:
G C T A G C A T G A C T C A T G C G T A C A G T T G A C C T G A C G T A C G A T C A G T C A T G
p-value:1e-13
log p-value:-3.084e+01
Information Content per bp:1.688
Number of Target Sequences with motif248.0
Percentage of Target Sequences with motif2.08%
Number of Background Sequences with motif455.7
Percentage of Background Sequences with motif1.25%
Average Position of motif in Targets100.5 +/- 53.4bp
Average Position of motif in Background93.2 +/- 66.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CAATTGATCAAT
--ATTGATTYND
 G T A C G T C A G C T A G C A T G A C T A C T G G T C A G C A T G T A C C T G A C G T A C G A T
A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:2
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:CAATTGATCAAT--
----DGATCRATAN
 G T A C G T C A G C T A G C A T G A C T A C T G G T C A G C A T G T A C C T G A C G T A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C

CUX1/MA0754.1/Jaspar

Match Rank:3
Score:0.69
Offset:4
Orientation:forward strand
Alignment:CAATTGATCAAT--
----TAATCGATAA
 G T A C G T C A G C T A G C A T G A C T A C T G G T C A G C A T G T A C C T G A C G T A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CAATTGATCAAT
-TATTGAYY---
 G T A C G T C A G C T A G C A T G A C T A C T G G T C A G C A T G T A C C T G A C G T A C G A T
A C G T G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C A C G T A C G T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:5
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CAATTGATCAAT
ATAAACAATTAAACA--
 A C G T A C G T A C G T A C G T A C G T G T A C G T C A G C T A G C A T G A C T A C T G G T C A G C A T G T A C C T G A C G T A C G A T
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A A C G T A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CAATTGATCAAT
TAATTGATTA--
 G T A C G T C A G C T A G C A T G A C T A C T G G T C A G C A T G T A C C T G A C G T A C G A T
C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A A C G T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CAATTGATCAAT
TCATCAATCA--
 G T A C G T C A G C T A G C A T G A C T A C T G G T C A G C A T G T A C C T G A C G T A C G A T
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T

Hmx3/MA0898.1/Jaspar

Match Rank:8
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CAATTGATCAAT
ACAAGCAATTAAAGAAT
 A C G T A C G T A C G T A C G T A C G T G T A C G T C A G C T A G C A T G A C T A C T G G T C A G C A T G T A C C T G A C G T A C G A T
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

PH0043.1_Hmx3/Jaspar

Match Rank:9
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CAATTGATCAAT
ACAAGCAATTAAAGAAT
 A C G T A C G T A C G T A C G T A C G T G T A C G T C A G C T A G C A T G A C T A C T G G T C A G C A T G T A C C T G A C G T A C G A T
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

LIN-39(Homeobox)/cElegans.L3-LIN39-ChIP-Seq(modEncode)/Homer

Match Rank:10
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CAATTGATCAAT
-CATYAATCAT-
 G T A C G T C A G C T A G C A T G A C T A C T G G T C A G C A T G T A C C T G A C G T A C G A T
A C G T G T A C C G T A C G A T G A T C G C T A C T G A A C G T G A T C C G T A G C A T A C G T