Information for 2-ACGATGAW (Motif 2)

C G T A G T A C A T C G C G T A G A C T T A C G G T C A C G A T
Reverse Opposite:
G C T A C A G T A T G C C T G A G C A T T A G C C A T G C G A T
p-value:1e-38
log p-value:-8.980e+01
Information Content per bp:1.417
Number of Target Sequences with motif6167.0
Percentage of Target Sequences with motif51.71%
Number of Background Sequences with motif16691.5
Percentage of Background Sequences with motif45.70%
Average Position of motif in Targets100.5 +/- 55.4bp
Average Position of motif in Background100.4 +/- 69.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.51
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RBP1-LIKE(RRM)/Drosophila_melanogaster-RNCMPT00127-PBM/HughesRNA

Match Rank:1
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:ACGATGAW
-CGTTGAT
 C G T A G T A C A T C G C G T A G A C T T A C G G T C A C G A T
A C G T A G T C A C T G G C A T A C G T A C T G C G T A A C G T

RSF1(RRM)/Drosophila_melanogaster-RNCMPT00061-PBM/HughesRNA

Match Rank:2
Score:0.75
Offset:0
Orientation:forward strand
Alignment:ACGATGAW
ACGACGA-
 C G T A G T A C A T C G C G T A G A C T T A C G G T C A C G A T
C G T A A G T C A C T G C G T A A G T C A C T G T C G A A C G T

Rbm4.3(RRM)/Danio_rerio-RNCMPT00248-PBM/HughesRNA

Match Rank:3
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-ACGATGAW
NACGACGA-
 A C G T C G T A G T A C A T C G C G T A G A C T T A C G G T C A C G A T
C T G A C T G A A G T C A C T G C T G A A G T C A C T G G T C A A C G T

AT2G15740(C2H2)/col-AT2G15740-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.75
Offset:-6
Orientation:forward strand
Alignment:------ACGATGAW
DHNDWATCGATD--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T A C A T C G C G T A G A C T T A C G G T C A C G A T
C G A T G A T C T A C G C T G A G C T A C G T A G C A T A G T C C T A G C G T A G C A T C G A T A C G T A C G T

RBM47(RRM)/Gallus_gallus-RNCMPT00279-PBM/HughesRNA

Match Rank:5
Score:0.73
Offset:2
Orientation:forward strand
Alignment:ACGATGAW-
--GATGATN
 C G T A G T A C A T C G C G T A G A C T T A C G G T C A C G A T A C G T
A C G T A C G T A C T G C G T A A C G T A T C G C G T A C G A T C G A T

Rbm47(RRM)/Xenopus_tropicalis-RNCMPT00280-PBM/HughesRNA

Match Rank:6
Score:0.71
Offset:2
Orientation:forward strand
Alignment:ACGATGAW-
--GATGATN
 C G T A G T A C A T C G C G T A G A C T T A C G G T C A C G A T A C G T
A C G T A C G T A C T G C G T A A C G T A T C G C G T A C G A T G A C T

CHA4(MacIsaac)/Yeast

Match Rank:7
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ACGATGAW
TGCGATGAG
 A C G T C G T A G T A C A T C G C G T A G A C T T A C G G T C A C G A T
G C A T T C A G G T A C C T A G C T G A A G C T T A C G G T C A C T A G

SRSF7(RRM,Znf)/Homo_sapiens-RNCMPT00073-PBM/HughesRNA

Match Rank:8
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ACGATGAW
GACGACGN-
 A C G T C G T A G T A C A T C G C G T A G A C T T A C G G T C A C G A T
C T A G C G T A A G T C A C T G C G T A A G T C C T A G C T A G A C G T

DOT6/MA0351.1/Jaspar

Match Rank:9
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----ACGATGAW--------
ANGANGCGATGAGGTGCNNNN
 A C G T A C G T A C G T A C G T A C G T C G T A G T A C A T C G C G T A G A C T T A C G G T C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A T C A G T A C G C T G A A C G T A C T G G T A C T C A G G T C A G C A T T A C G T G C A A T C G T A C G G C A T T C A G G T A C T G C A T C A G T G C A G C T A

TOD6/MA0350.1/Jaspar

Match Rank:10
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----ACGATGAW--------
NNANNGCGATGAGCTNNNNNN
 A C G T A C G T A C G T A C G T A C G T C G T A G T A C A T C G C G T A G A C T T A C G G T C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C G T A C T G A C T G A A T G C A T C G G T A C T C A G G T C A G C A T C T A G T G C A A T C G T A G C G C A T C T A G G C A T C A T G T G A C T G A C G C A T