Information for 8-CRAAATTCACAA (Motif 16)

G T A C T C A G T C G A C G T A G C T A G C A T A G C T A G T C C G T A T A G C T G C A C T G A
Reverse Opposite:
G A C T A C G T A T C G G C A T C T A G T C G A C G T A C G A T G C A T A G C T A G T C C A T G
p-value:1e-15
log p-value:-3.522e+01
Information Content per bp:1.673
Number of Target Sequences with motif297.0
Percentage of Target Sequences with motif2.49%
Number of Background Sequences with motif551.6
Percentage of Background Sequences with motif1.51%
Average Position of motif in Targets96.6 +/- 56.2bp
Average Position of motif in Background98.1 +/- 62.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tb_0251(RRM)/Trypanosoma_brucei-RNCMPT00251-PBM/HughesRNA

Match Rank:1
Score:0.70
Offset:4
Orientation:forward strand
Alignment:CRAAATTCACAA
----ATTCACA-
 G T A C T C A G T C G A C G T A G C T A G C A T A G C T A G T C C G T A T A G C T G C A C T G A
A C G T A C G T A C G T A C G T G C T A C G A T A C G T A G T C C G T A A G T C C T G A A C G T

tll/dmmpmm(Papatsenko)/fly

Match Rank:2
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CRAAATTCACAA
--AAAGTCAAA-
 G T A C T C A G T C G A C G T A G C T A G C A T A G C T A G T C C G T A T A G C T G C A C T G A
A C G T A C G T C G T A C G T A C G T A C T A G A C G T A C G T C G T A C T A G C G T A A C G T

TCX3/MA1682.1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CRAAATTCACAA--
TAAAATTCAAATTT
 G T A C T C A G T C G A C G T A G C T A G C A T A G C T A G T C C G T A T A G C T G C A C T G A A C G T A C G T
G C A T G C T A C G T A C G T A C G T A C G A T C G A T A G T C C G T A C G T A C G T A G C A T G C A T G C A T

AT2G20110/MA1380.1/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CRAAATTCACAA
TTNAAAAATTTAAAA
 A C G T A C G T A C G T G T A C T C A G T C G A C G T A G C T A G C A T A G C T A G T C C G T A T A G C T G C A C T G A
C G A T G C A T G C T A G C T A G T C A C T G A C G T A C G T A A C G T A C G T A G C T C T G A G T C A C G T A G C T A

AGL55/MA1202.1/Jaspar

Match Rank:5
Score:0.65
Offset:6
Orientation:forward strand
Alignment:CRAAATTCACAA
------TCACCA
 G T A C T C A G T C G A C G T A G C T A G C A T A G C T A G T C C G T A T A G C T G C A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C C G T A A G T C A G T C C G T A

TCX2/MA1162.1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CRAAATTCACAA
ATTTAAAATTCAAAT
 A C G T A C G T A C G T G T A C T C A G T C G A C G T A G C T A G C A T A G C T A G T C C G T A T A G C T G C A C T G A
C G T A C G A T G C A T G A C T T G C A C T G A G C T A C G T A C G A T A C G T A G T C T C G A C G T A C G T A G C A T

IGF2BP3(KH,RRM)/Homo_sapiens-RNCMPT00172-PBM/HughesRNA

Match Rank:7
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CRAAATTCACAA
--ACANACA---
 G T A C T C A G T C G A C G T A G C T A G C A T A G C T A G T C C G T A T A G C T G C A C T G A
A C G T A C G T G T C A G T A C G C T A G C T A G C T A G T A C G T C A A C G T A C G T A C G T

lin-54/MA1450.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CRAAATTCACAA--
GGAAATTCAAATTT
 G T A C T C A G T C G A C G T A G C T A G C A T A G C T A G T C C G T A T A G C T G C A C T G A A C G T A C G T
T C A G T C A G C T G A C G T A C G T A G A C T C A G T G A T C T C G A G C T A C G T A G C A T C G A T C A G T

tll/MA0459.1/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CRAAATTCACAA
-AAAAGTCAAA-
 G T A C T C A G T C G A C G T A G C T A G C A T A G C T A G T C C G T A T A G C T G C A C T G A
A C G T C G T A C T G A C G T A T C G A A C T G A G C T A G T C C G T A C G T A G T C A A C G T

ASHR1(ND)/col-ASHR1-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:CRAAATTCACAA-
-----NTCACCAN
 G T A C T C A G T C G A C G T A G C T A G C A T A G C T A G T C C G T A T A G C T G C A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A T A G C G T A C G C T A G A C T