Information for 11-KCSGCTSC (Motif 15)

C A T G G A T C A T C G C A T G T A G C G C A T A T C G A G T C
Reverse Opposite:
T C A G T A G C C G T A A C T G G T A C T A G C C T A G G T A C
p-value:1e-15
log p-value:-3.534e+01
Information Content per bp:1.447
Number of Target Sequences with motif1908.0
Percentage of Target Sequences with motif16.00%
Number of Background Sequences with motif4902.0
Percentage of Background Sequences with motif13.42%
Average Position of motif in Targets102.4 +/- 53.7bp
Average Position of motif in Background99.4 +/- 61.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:KCSGCTSC
--NGCTN-
 C A T G G A T C A T C G C A T G T A G C G C A T A T C G A G T C
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

AT5G23930(mTERF)/col-AT5G23930-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-KCSGCTSC
GGCGGCTG-
 A C G T C A T G G A T C A T C G C A T G T A G C G C A T A T C G A G T C
A C T G C T A G A G T C A C T G A C T G A G T C A C G T C T A G A C G T

At2g33710(AP2EREBP)/colamp-At2g33710-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---KCSGCTSC
WTKGCGGCKR-
 A C G T A C G T A C G T C A T G G A T C A T C G C A T G T A G C G C A T A T C G A G T C
C G T A G C A T C A T G C T A G A G T C A C T G A T C G G T A C A C T G T C A G A C G T

ERF1(AP2EREBP)/colamp-ERF1-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-KCSGCTSC
GGCGGCTR-
 A C G T C A T G G A T C A T C G C A T G T A G C G C A T A T C G A G T C
A C T G A C T G A G T C A C T G A C T G A G T C A C G T C T A G A C G T

STP1/MA0394.1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-KCSGCTSC
TGCGGCGC-
 A C G T C A T G G A T C A T C G C A T G T A G C G C A T A T C G A G T C
A G C T C T A G A G T C A C T G C T A G A G T C C A T G A T G C A C G T

ERF2(AP2EREBP)/colamp-ERF2-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-KCSGCTSC
GGCGGCTG-
 A C G T C A T G G A T C A T C G C A T G T A G C G C A T A T C G A G T C
A C T G A C T G A G T C A C T G A C T G A G T C A C G T T C A G A C G T

ERF105(AP2EREBP)/colamp-ERF105-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--KCSGCTSC
TGGCGGCT--
 A C G T A C G T C A T G G A T C A T C G C A T G T A G C G C A T A T C G A G T C
G C A T A C T G C T A G A G T C A C T G A C T G A G T C A C G T A C G T A C G T

STP1(MacIsaac)/Yeast

Match Rank:8
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-KCSGCTSC
TGCGGCGC-
 A C G T C A T G G A T C A T C G C A T G T A G C G C A T A T C G A G T C
A G C T C T A G A G T C A C T G C T A G A G T C C A T G A T G C A C G T

ZC3H10(Znf)/Homo_sapiens-RNCMPT00085-PBM/HughesRNA

Match Rank:9
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:KCSGCTSC
-GCGCTGC
 C A T G G A T C A T C G C A T G T A G C G C A T A T C G A G T C
A C G T A C T G A G T C A C T G A G T C A C G T A T C G A T G C

ERF115(AP2EREBP)/colamp-ERF115-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---KCSGCTSC
WTKRCGGCGB-
 A C G T A C G T A C G T C A T G G A T C A T C G C A T G T A G C G C A T A T C G A G T C
C G T A G C A T C A G T C T A G A G T C A C T G A C T G G T A C A C T G A T C G A C G T