Information for 1-TTAGGGTTYV (Motif 1)

A G C T A C G T C G T A T A C G T A C G A C T G C G A T A C G T G A C T T A C G
Reverse Opposite:
A T G C C T G A C G T A C G T A G T A C A T G C A T G C A C G T C G T A C T G A
p-value:1e-49
log p-value:-1.150e+02
Information Content per bp:1.752
Number of Target Sequences with motif1000.0
Percentage of Target Sequences with motif8.38%
Number of Background Sequences with motif1866.1
Percentage of Background Sequences with motif5.11%
Average Position of motif in Targets99.7 +/- 57.4bp
Average Position of motif in Background99.2 +/- 66.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AT1G72740/MA1353.1/Jaspar

Match Rank:1
Score:0.91
Offset:-4
Orientation:forward strand
Alignment:----TTAGGGTTYV-
GGATTTAGGGTTTAG
 A C G T A C G T A C G T A C G T A G C T A C G T C G T A T A C G T A C G A C T G C G A T A C G T G A C T T A C G A C G T
C T A G C T A G C T G A C G A T G A C T G C A T C T G A A T C G A C T G A C T G G A C T G C A T G C A T G C T A A C T G

TBF1/MA0403.1/Jaspar

Match Rank:2
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:TTAGGGTTYV
NTAGGGTT--
 A G C T A C G T C G T A T A C G T A C G A C T G C G A T A C G T G A C T T A C G
A G C T A G C T C T G A A C T G A C T G A C T G A G C T G C A T A C G T A C G T

TBP3/MA1355.1/Jaspar

Match Rank:3
Score:0.87
Offset:-2
Orientation:reverse strand
Alignment:--TTAGGGTTYV---
AATTAGGGTTTANTT
 A C G T A C G T A G C T A C G T C G T A T A C G T A C G A C T G C G A T A C G T G A C T T A C G A C G T A C G T A C G T
C T G A C G T A G A C T A C G T C G T A A C T G A C T G A C T G A G C T C G A T G C A T G C T A C G T A C G A T C G A T

AT1G72740(MYBrelated)/colamp-AT1G72740-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.86
Offset:-4
Orientation:reverse strand
Alignment:----TTAGGGTTYV-
NNWDTTAGGKTWWNN
 A C G T A C G T A C G T A C G T A G C T A C G T C G T A T A C G T A C G A C T G C G A T A C G T G A C T T A C G A C G T
C G A T G C T A G C T A C G T A G A C T A C G T C G T A A C T G A C T G A C G T A G C T C G A T G C T A G C T A G C A T

MUB(KH)/Drosophila_melanogaster-RNCMPT00137-PBM/HughesRNA

Match Rank:5
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:TTAGGGTTYV
-TAGGGTT--
 A G C T A C G T C G T A T A C G T A C G A C T G C G A T A C G T G A C T T A C G
A C G T C G A T G T C A T A C G A C T G A C T G A C G T C G A T A C G T A C G T

P0510F09.23/MA1030.1/Jaspar

Match Rank:6
Score:0.86
Offset:-2
Orientation:reverse strand
Alignment:--TTAGGGTTYV
NNNTAGGGTT--
 A C G T A C G T A G C T A C G T C G T A T A C G T A C G A C T G C G A T A C G T G A C T T A C G
C T G A C A G T A G T C G A C T C G T A A C T G C A T G C A T G G A C T C G A T A C G T A C G T

HNRNPA1L2(RRM)/Homo_sapiens-RNCMPT00023-PBM/HughesRNA

Match Rank:7
Score:0.85
Offset:0
Orientation:forward strand
Alignment:TTAGGGTTYV
TTAGGGA---
 A G C T A C G T C G T A T A C G T A C G A C T G C G A T A C G T G A C T T A C G
C A G T A C G T C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T

HNRNPA1(RRM)/Homo_sapiens-RNCMPT00022-PBM/HughesRNA

Match Rank:8
Score:0.81
Offset:0
Orientation:forward strand
Alignment:TTAGGGTTYV
NTAGGGA---
 A G C T A C G T C G T A T A C G T A C G A C T G C G A T A C G T G A C T T A C G
C A G T A C G T C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T

HNRNPA2B1(RRM)/Homo_sapiens-RNCMPT00024-PBM/HughesRNA

Match Rank:9
Score:0.79
Offset:0
Orientation:forward strand
Alignment:TTAGGGTTYV
NTAGGGA---
 A G C T A C G T C G T A T A C G T A C G A C T G C G A T A C G T G A C T T A C G
C A G T A C G T C G T A A C T G A C T G A C T G C G T A A C G T A C G T A C G T

TRP2(MYBrelated)/colamp-TRP2-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:TTAGGGTTYV
--AGGGTTTA
 A G C T A C G T C G T A T A C G T A C G A C T G C G A T A C G T G A C T T A C G
A C G T A C G T C G T A A C T G A C T G C T A G A C G T A C G T A C G T C G T A