Information for 6-TGTGTCTGAATT (Motif 9)

G C A T A C T G C G A T A C T G C G A T A G T C C A G T T C A G C T G A C G T A C G A T G A C T
Reverse Opposite:
C T G A G C T A G C A T G A C T A G T C G T C A T C A G G C T A T G A C G C T A T G A C C G T A
p-value:1e-18
log p-value:-4.236e+01
Information Content per bp:1.587
Number of Target Sequences with motif710.0
Percentage of Target Sequences with motif5.95%
Number of Background Sequences with motif1543.0
Percentage of Background Sequences with motif4.22%
Average Position of motif in Targets99.6 +/- 55.4bp
Average Position of motif in Background98.2 +/- 59.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nv_0278(RRM)/Nematostella_vectensis-RNCMPT00278-PBM/HughesRNA

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTCTGAATT
NTGTGTCT-----
 A C G T G C A T A C T G C G A T A C T G C G A T A G T C C A G T T C A G C T G A C G T A C G A T G A C T
G T C A A C G T T A C G A C G T C T A G A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T

SM(RRM)/Drosophila_melanogaster-RNCMPT00069-PBM/HughesRNA

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGTGTCTGAATT
TGTGTGT-----
 G C A T A C T G C G A T A C T G C G A T A G T C C A G T T C A G C T G A C G T A C G A T G A C T
A C G T A C T G A G C T A C T G A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGTGTCTGAATT--
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T G C A T A C T G C G A T A C T G C G A T A G T C C A G T T C A G C T G A C G T A C G A T G A C T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

SGR5(C2H2)/colamp-SGR5-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGTGTCTGAATT
TTTGTCTTTTTT
 G C A T A C T G C G A T A C T G C G A T A G T C C A G T T C A G C T G A C G T A C G A T G A C T
G A C T A C G T A C G T A C T G A C G T A G T C G C A T A G C T G C A T G C A T G A C T A G C T

TCX3/MA1682.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGTGTCTGAATT---
-AAATTTGAATTTTA
 G C A T A C T G C G A T A C T G C G A T A G T C C A G T T C A G C T G A C G T A C G A T G A C T A C G T A C G T A C G T
A C G T C G T A C G T A C G T A G C A T G C A T G C A T A C T G G C T A G C T A G C A T G C A T G C A T C G A T C G T A

HNRNPL(RRM)/Homo_sapiens-RNCMPT00027-PBM/HughesRNA

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGTGTCTGAATT
TGTGTGT-----
 G C A T A C T G C G A T A C T G C G A T A G T C C A G T T C A G C T G A C G T A C G A T G A C T
A C G T A C T G C G A T C T A G A C G T C A T G A C G T A C G T A C G T A C G T A C G T A C G T

BRUNOL5(RRM)/Homo_sapiens-RNCMPT00166-PBM/HughesRNA

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGTGTCTGAATT
TGTGTGT-----
 G C A T A C T G C G A T A C T G C G A T A G T C C A G T T C A G C T G A C G T A C G A T G A C T
A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

sma-4/MA0925.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGTGTCTGAATT
AGTGTCTGGAC-
 G C A T A C T G C G A T A C T G C G A T A G T C C A G T T C A G C T G A C G T A C G A T G A C T
C G T A T C A G A C G T A C T G C G A T A G T C A C G T C T A G A C T G T C G A A G T C A C G T

ARF2(ARF)/col-ARF2-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGTGTCTGAATT
-TTGTCGGMWN-
 G C A T A C T G C G A T A C T G C G A T A G T C C A G T T C A G C T G A C G T A C G A T G A C T
A C G T G C A T A C G T A C T G A C G T A G T C A C T G A T C G G T C A C G A T C G T A A C G T

PAPI(KH)/Drosophila_melanogaster-RNCMPT00011-PBM/HughesRNA

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGTGTCTGAATT
TGTGTGT-----
 G C A T A C T G C G A T A C T G C G A T A G T C C A G T T C A G C T G A C G T A C G A T G A C T
A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T