Information for 5-AGTCGTTCGCCT (Motif 8)

G C T A T C A G C A G T A T G C C A T G G A C T C G A T G A T C C A T G G T A C A G T C C A G T
Reverse Opposite:
G T C A T C A G A C T G G T A C C T A G C G T A C G T A G A T C T A C G G T C A A G T C C G A T
p-value:1e-19
log p-value:-4.501e+01
Information Content per bp:1.702
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets132.5 +/- 57.3bp
Average Position of motif in Background101.9 +/- 59.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Lm_0254(RRM)/Leishmania_major-RNCMPT00254-PBM/HughesRNA

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:AGTCGTTCGCCT
--TCGTTCN---
 G C T A T C A G C A G T A T G C C A T G G A C T C G A T G A T C C A T G G T A C A G T C C A G T
A C G T A C G T A C G T A G T C A C T G A C G T A C G T A G T C C G A T A C G T A C G T A C G T

UPC2/MA0411.1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AGTCGTTCGCCT
--TCGTATA---
 G C T A T C A G C A G T A T G C C A T G G A C T C G A T G A T C C A T G G T A C A G T C C A G T
A C G T A C G T A G C T A G T C A C T G A C G T C G T A G A C T T C G A A C G T A C G T A C G T

FXR1(KH)/Homo_sapiens-RNCMPT00161-PBM/HughesRNA

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGTCGTTCGCCT
TTGTCATT-----
 A C G T G C T A T C A G C A G T A T G C C A T G G A C T C G A T G A T C C A T G G T A C A G T C C A G T
A C G T A G C T A C T G A G C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SPL7/MA1060.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGTCGTTCGCCT
-GNCGTACG---
 G C T A T C A G C A G T A T G C C A T G G A C T C G A T G A T C C A T G G T A C A G T C C A G T
A C G T C T A G A G T C A T G C C A T G C A G T G T C A A G T C A T C G A C G T A C G T A C G T

SRSF7(RRM,Znf)/Homo_sapiens-RNCMPT00073-PBM/HughesRNA

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGTCGTTCGCCT
NCGTCGTC-----
 A C G T G C T A T C A G C A G T A T G C C A T G G A C T C G A T G A T C C A T G G T A C A G T C C A G T
A G T C A G T C A C T G A C G T A G T C A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T

RO3G_00049(RRM)/Rhizopus_oryzae-RNCMPT00205-PBM/HughesRNA

Match Rank:6
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:AGTCGTTCGCCT
-----TTCCCCT
 G C T A T C A G C A G T A T G C C A T G G A C T C G A T G A T C C A T G G T A C A G T C C A G T
A C G T A C G T A C G T A C G T A C G T C G A T A G C T A G T C A G T C A G T C G T A C A G C T

CG2950(KH)/Drosophila_melanogaster-RNCMPT00007-PBM/HughesRNA

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGTCGTTCGCCT
-NTCGTTG----
 G C T A T C A G C A G T A T G C C A T G G A C T C G A T G A T C C A T G G T A C A G T C C A G T
A C G T A C G T A C G T A G T C A C T G A C G T A G C T A C T G A C G T A C G T A C G T A C G T

RSF1(RRM)/Drosophila_melanogaster-RNCMPT00061-PBM/HughesRNA

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGTCGTTCGCCT
TCGTCGT------
 A C G T G C T A T C A G C A G T A T G C C A T G G A C T C G A T G A T C C A T G G T A C A G T C C A G T
A G C T A G T C A C T G A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MYB56(MYB)/colamp-MYB56-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGTCGTTCGCCT
RDKYCGTTAD---
 A C G T G C T A T C A G C A G T A T G C C A T G G A C T C G A T G A T C C A T G G T A C A G T C C A G T
C T G A C T A G C A T G G A T C T G A C A C T G C A G T G A C T T C G A C A T G A C G T A C G T A C G T

LIN28A(CSD,Znf)/Homo_sapiens-RNCMPT00036-PBM/HughesRNA

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:AGTCGTTCGCCT
-----TTCTCCN
 G C T A T C A G C A G T A T G C C A T G G A C T C G A T G A T C C A T G G T A C A G T C C A G T
A C G T A C G T A C G T A C G T A C G T A G C T C G A T A G T C A C G T A G T C A G T C C A T G