Information for 2-CGACGAAA (Motif 4)

T G A C A T C G G T C A G T A C T A C G C G T A C G T A C G T A
Reverse Opposite:
G C A T C G A T G C A T A T G C C A T G C A G T T A G C A C T G
p-value:1e-27
log p-value:-6.347e+01
Information Content per bp:1.777
Number of Target Sequences with motif7091.0
Percentage of Target Sequences with motif59.45%
Number of Background Sequences with motif19906.1
Percentage of Background Sequences with motif54.47%
Average Position of motif in Targets100.3 +/- 55.6bp
Average Position of motif in Background100.2 +/- 66.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.45
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RSF1(RRM)/Drosophila_melanogaster-RNCMPT00061-PBM/HughesRNA

Match Rank:1
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-CGACGAAA
ACGACGA--
 A C G T T G A C A T C G G T C A G T A C T A C G C G T A C G T A C G T A
C G T A A G T C A C T G C G T A A G T C A C T G T C G A A C G T A C G T

CG2950(KH)/Drosophila_melanogaster-RNCMPT00007-PBM/HughesRNA

Match Rank:2
Score:0.78
Offset:0
Orientation:forward strand
Alignment:CGACGAAA
CAACGAN-
 T G A C A T C G G T C A G T A C T A C G C G T A C G T A C G T A
A G T C C T G A C G T A A G T C A C T G C G T A T G C A A C G T

Rbm4.3(RRM)/Danio_rerio-RNCMPT00248-PBM/HughesRNA

Match Rank:3
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CGACGAAA
NACGACGA--
 A C G T A C G T T G A C A T C G G T C A G T A C T A C G C G T A C G T A C G T A
C T G A C T G A A G T C A C T G C T G A A G T C A C T G G T C A A C G T A C G T

SRSF7(RRM,Znf)/Homo_sapiens-RNCMPT00073-PBM/HughesRNA

Match Rank:4
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CGACGAAA
GACGACGN--
 A C G T A C G T T G A C A T C G G T C A G T A C T A C G C G T A C G T A C G T A
C T A G C G T A A G T C A C T G C G T A A G T C C T A G C T A G A C G T A C G T

RBM45(RRM)/Homo_sapiens-RNCMPT00241-PBM/HughesRNA

Match Rank:5
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CGACGAAA
-GACGACA
 T G A C A T C G G T C A G T A C T A C G C G T A C G T A C G T A
A C G T A C T G C G T A T A G C A C T G C T G A G T A C T G C A

JKD(C2H2)/col-JKD-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----CGACGAAA
AAAACGACAAAA
 A C G T A C G T A C G T A C G T T G A C A T C G G T C A G T A C T A C G C G T A C G T A C G T A
C G T A C G T A C G T A T G C A T G A C A C T G G T C A A G T C C T G A C T G A T C G A C G T A

Deaf1/dmmpmm(Pollard)/fly

Match Rank:7
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CGACGAAA
-CACGAA-
 T G A C A T C G G T C A G T A C T A C G C G T A C G T A C G T A
A C G T T A G C G T A C A G T C A C T G C G T A C T G A A C G T

Deaf1/MA0185.1/Jaspar

Match Rank:8
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CGACGAAA
-CACGAA-
 T G A C A T C G G T C A G T A C T A C G C G T A C G T A C G T A
A C G T T A G C G T A C A G T C A C T G C G T A C T G A A C G T

FHL1/MA0295.1/Jaspar

Match Rank:9
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CGACGAAA-
-GACGCAAA
 T G A C A T C G G T C A G T A C T A C G C G T A C G T A C G T A A C G T
A C G T A T C G C G T A A G T C A C T G A G T C C G T A T G C A C G T A

PB0179.1_Sp100_2/Jaspar

Match Rank:10
Score:0.70
Offset:-8
Orientation:reverse strand
Alignment:--------CGACGAAA
NNTTTANNCGACGNA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C A T C G G T C A G T A C T A C G C G T A C G T A C G T A
T A G C G C A T C G A T C G A T C G A T G T C A T G C A C A T G A G T C A C T G C G T A A G T C C T A G T A C G T C G A A C G T