Information for 20-GCATAAATTA (Motif 33)

A C T G A G T C C G T A A C G T C G T A C G T A C G T A A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C G T A C G T A C G T C G T A A C G T A C T G A G T C
p-value:1e-3
log p-value:-8.902e+00
Information Content per bp:1.530
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.08%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets96.1 +/- 55.5bp
Average Position of motif in Background99.7 +/- 46.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX2/MA1113.2/Jaspar

Match Rank:1
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-GCATAAATTA--
GTCATAAATCATT
 A C G T A C T G A G T C C G T A A C G T C G T A C G T A C G T A A C G T A C G T C G T A A C G T A C G T
T C A G G A C T G T A C C T G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G A C T G C A T

cad/dmmpmm(Bergman)/fly

Match Rank:2
Score:0.77
Offset:1
Orientation:forward strand
Alignment:GCATAAATTA
-CATAAA---
 A C T G A G T C C G T A A C G T C G T A C G T A C G T A A C G T A C G T C G T A
A C G T A G T C C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C G T

ANL2/MA1375.1/Jaspar

Match Rank:3
Score:0.77
Offset:0
Orientation:forward strand
Alignment:GCATAAATTA-
GCATTAATTAC
 A C T G A G T C C G T A A C G T C G T A C G T A C G T A A C G T A C G T C G T A A C G T
C A T G G A T C C G T A A G C T A G C T C G T A C G T A G C A T C A G T C T G A G A T C

HDG1/MA1369.1/Jaspar

Match Rank:4
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GCATAAATTA-
GCATTAATTAC
 A C T G A G T C C G T A A C G T C G T A C G T A C G T A A C G T A C G T C G T A A C G T
C A T G G A T C C G T A A C G T A G C T C G T A C G T A C G A T C A G T C T G A G A T C

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:5
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GCATAAATTA---
NNCCATAAATCATNN
 A C G T A C G T A C T G A G T C C G T A A C G T C G T A C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T
C T G A T C A G G A T C G T A C T C G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G C A T G C A T G A C T

abd-A/dmmpmm(Down)/fly

Match Rank:6
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:GCATAAATTA
--ATAAAT--
 A C T G A G T C C G T A A C G T C G T A C G T A C G T A A C G T A C G T C G T A
A C G T A C G T C G T A G C A T G T C A G C T A G C T A G C A T A C G T A C G T

mab-5/MA1442.1/Jaspar

Match Rank:7
Score:0.73
Offset:2
Orientation:forward strand
Alignment:GCATAAATTA
--ATTAATTA
 A C T G A G T C C G T A A C G T C G T A C G T A C G T A A C G T A C G T C G T A
A C G T A C G T T C G A G A C T G A C T C G T A C G T A C G A T C G A T C T G A

tll/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:GCATAAATTA-
----AAATTAA
 A C T G A G T C C G T A A C G T C G T A C G T A C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T C G T A C G T A

cad/dmmpmm(SeSiMCMC)/fly

Match Rank:9
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCATAAATTA
GCATAAA---
 A C T G A G T C C G T A A C G T C G T A C G T A C G T A A C G T A C G T C G T A
C T A G T A G C G C T A C G A T G C T A G C T A G T C A A C G T A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:10
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GCATAAATTA
GGCCATAAATCA
 A C G T A C G T A C T G A G T C C G T A A C G T C G T A C G T A C G T A A C G T A C G T C G T A
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A