Information for 19-CACGCTTTGT (Motif 32)

A T G C C G T A A G T C A C T G A G T C A C G T A C G T A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A C G T A C G T A A C T G A G T C A C T G A C G T A T C G
p-value:1e-6
log p-value:-1.387e+01
Information Content per bp:1.959
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.08%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets107.8 +/- 47.4bp
Average Position of motif in Background38.7 +/- 10.9bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.2/Jaspar

Match Rank:1
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:CACGCTTTGT---
--NNCTTTGTTNN
 A T G C C G T A A G T C A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

SOX4/MA0867.2/Jaspar

Match Rank:2
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:CACGCTTTGT--
--NCCTTTGTTC
 A T G C C G T A A G T C A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A G T C A G T C G A T C C G A T A G C T A G C T T A C G C G A T A G C T G A T C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.74
Offset:3
Orientation:forward strand
Alignment:CACGCTTTGT---
---CCWTTGTYYB
 A T G C C G T A A G T C A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.71
Offset:3
Orientation:forward strand
Alignment:CACGCTTTGT---
---YCTTTGTTCC
 A T G C C G T A A G T C A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Dof3/MA0021.1/Jaspar

Match Rank:5
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CACGCTTTGT
--CGCTTT--
 A T G C C G T A A G T C A C T G A G T C A C G T A C G T A C G T A C T G A C G T
A C G T A C G T A G T C T C A G A G T C A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CACGCTTTGT
AGGVNCCTTTGT
 A C G T A C G T A T G C C G T A A G T C A C T G A G T C A C G T A C G T A C G T A C T G A C G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

MNB1A/MA0053.1/Jaspar

Match Rank:7
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:CACGCTTTGT
---GCTTT--
 A T G C C G T A A G T C A C T G A G T C A C G T A C G T A C G T A C T G A C G T
A C G T A C G T A C G T C A T G A G T C A C G T A C G T A C G T A C G T A C G T

PBF/MA0064.1/Jaspar

Match Rank:8
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:CACGCTTTGT
---GCTTT--
 A T G C C G T A A G T C A C T G A G T C A C G T A C G T A C G T A C T G A C G T
A C G T A C G T A C G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:9
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CACGCTTTGT---
---CCTTTGTTTT
 A T G C C G T A A G T C A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:10
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CACGCTTTGT----
--BCCWTTGTBYKV
 A T G C C G T A A G T C A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A T G C G A C T A C T G T A C G