Information for 17-CGCTAAAA (Motif 31)

A G T C A C T G A G T C A C G T G T C A C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C T G
p-value:1e-6
log p-value:-1.502e+01
Information Content per bp:1.954
Number of Target Sequences with motif111.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif203.1
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets103.5 +/- 50.6bp
Average Position of motif in Background104.0 +/- 67.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STB1(MacIsaac)/Yeast

Match Rank:1
Score:0.82
Offset:0
Orientation:forward strand
Alignment:CGCTAAAA
CGCGAAAA
 A G T C A C T G A G T C A C G T G T C A C G T A C G T A C G T A
T A G C T C A G A T G C T A C G C T G A T C G A C T G A G C T A

SWI4(MacIsaac)/Yeast

Match Rank:2
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-CGCTAAAA
ACGCGAAAA
 A C G T A G T C A C T G A G T C A C G T G T C A C G T A C G T A C G T A
T G C A T G A C C T A G G A T C T A C G C T G A C T G A G T C A C T G A

KHDRBS1(KH)/Mus_musculus-RNCMPT00062-PBM/HughesRNA

Match Rank:3
Score:0.73
Offset:3
Orientation:forward strand
Alignment:CGCTAAAA--
---TAAAAGG
 A G T C A C T G A G T C A C G T G T C A C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A T A C G T A C G

SWI4/SWI4_YPD/29-SWI4,29-SWI6(Harbison)/Yeast

Match Rank:4
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CGCTAAAA
GACGCGAAA-
 A C G T A C G T A G T C A C T G A G T C A C G T G T C A C G T A C G T A C G T A
C T A G G T C A T A G C T C A G T A G C T A C G C G T A T G C A C T G A A C G T

SWI6/SWI6_YPD/9-SWI4,9-SWI6(Harbison)/Yeast

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CGCTAAAA
ACGCGAAA-
 A C G T A G T C A C T G A G T C A C G T G T C A C G T A C G T A C G T A
T C G A T A G C C T A G T A G C T A C G G C T A T G C A C T G A A C G T

gt/dmmpmm(SeSiMCMC)/fly

Match Rank:6
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:CGCTAAAA-
---TAAAAA
 A G T C A C T G A G T C A C G T G T C A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T C G T A C G T A C G T A T C G A C G T A

STP3/MA0396.1/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CGCTAAAA
TGCGCTAGC-
 A C G T A C G T A G T C A C T G A G T C A C G T G T C A C G T A C G T A C G T A
G C A T T A C G A G T C A C T G A G T C A C G T C G T A T A C G G A T C A C G T

AT5G47660/MA1365.2/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CGCTAAAA--
ATGGTAAAAAA
 A C G T A G T C A C T G A G T C A C G T G T C A C G T A C G T A C G T A A C G T A C G T
C G T A G C A T C T A G A C T G A G C T C G T A C G T A C G T A C G T A C G T A G C T A

AT1G76880(Trihelix)/col-AT1G76880-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CGCTAAAA-
ACGGTAAAAW
 A C G T A G T C A C T G A G T C A C G T G T C A C G T A C G T A C G T A A C G T
T C G A G T A C T C A G A C T G A C G T C G T A C G T A C G T A C G T A G C T A

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:10
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CGCTAAAA
TTCGCGCGAAAA
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C G T G T C A C G T A C G T A C G T A
A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A