Information for 3-ATCGGAGTAA (Motif 3)

G C T A G C A T A G T C C A T G C A T G T C G A T C A G C A G T T G C A C G T A
Reverse Opposite:
G C A T A C G T G T C A A G T C A G C T G T A C G T A C C T A G C G T A C G A T
p-value:1e-33
log p-value:-7.650e+01
Information Content per bp:1.604
Number of Target Sequences with motif2475.0
Percentage of Target Sequences with motif20.75%
Number of Background Sequences with motif6033.9
Percentage of Background Sequences with motif16.51%
Average Position of motif in Targets99.1 +/- 55.9bp
Average Position of motif in Background99.3 +/- 66.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YLR278C/MA0430.1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:ATCGGAGTAA
-CCGGAGTT-
 G C T A G C A T A G T C C A T G C A T G T C G A T C A G C A G T T G C A C G T A
A C G T A G T C A G T C A C T G A C T G C T G A T A C G C G A T C G A T A C G T

OAF1/MA0348.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:ATCGGAGTAA
-TCGGAGATA
 G C T A G C A T A G T C C A T G C A T G T C G A T C A G C A G T T G C A C G T A
A C G T A G C T A G T C A C T G A C T G C T G A C A T G C G T A C G A T C G T A

URC2/MA0422.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:ATCGGAGTAA-
-CCGGAGATAA
 G C T A G C A T A G T C C A T G C A T G T C G A T C A G C A G T T G C A C G T A A C G T
A C G T G A T C A G T C A C T G A C T G T C G A T C A G C G T A C G A T G T C A G C T A

RGT1/MA0367.1/Jaspar

Match Rank:4
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:ATCGGAGTAA--
-NCGGAAAAANT
 G C T A G C A T A G T C C A T G C A T G T C G A T C A G C A G T T G C A C G T A A C G T A C G T
A C G T G A T C G T A C A C T G A C T G C T G A C G T A G C T A C G T A C G T A G A C T G A C T

RDS2/MA0362.1/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ATCGGAGTAA
CTCGGGG---
 G C T A G C A T A G T C C A T G C A T G T C G A T C A G C A G T T G C A C G T A
T G A C A C G T A G T C A C T G A C T G C T A G C T A G A C G T A C G T A C G T

PF10_0214(RRM)/Plasmodium_falciparum-RNCMPT00240-PBM/HughesRNA

Match Rank:6
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ATCGGAGTAA
-TCGGAAT--
 G C T A G C A T A G T C C A T G C A T G T C G A T C A G C A G T T G C A C G T A
A C G T A C G T A G T C A C T G A C T G C G T A C G T A C G A T A C G T A C G T

YNR063W/MA0432.1/Jaspar

Match Rank:7
Score:0.68
Offset:1
Orientation:forward strand
Alignment:ATCGGAGTAA
-TCGGAGAT-
 G C T A G C A T A G T C C A T G C A T G T C G A T C A G C A G T T G C A C G T A
A C G T A C G T A G T C A C T G A C T G C G T A C A T G C G T A C G A T A C G T

STB4/MA0391.1/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ATCGGAGTAA
CTCGGAA---
 G C T A G C A T A G T C C A T G C A T G T C G A T C A G C A G T T G C A C G T A
A G T C A C G T A G T C A C T G A C T G C G T A C G T A A C G T A C G T A C G T

YPR196W/MA0437.1/Jaspar

Match Rank:9
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:ATCGGAGTAA-
--CGGAGAAAT
 G C T A G C A T A G T C C A T G C A T G T C G A T C A G C A G T T G C A C G T A A C G T
A C G T A C G T G T A C A C T G A T C G C T G A C T A G C G T A C G T A C G T A G A C T

HAP1/MA0312.1/Jaspar

Match Rank:10
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ATCGGAGTAA
--CGGAGATA
 G C T A G C A T A G T C C A T G C A T G T C G A T C A G C A G T T G C A C G T A
A C G T A C G T A G T C A C T G A C T G C T G A A T C G C G T A A C G T C G T A