Information for 16-TGTTGCTG (Motif 29)

A G C T A C T G A C G T A G C T A C T G A G T C C G A T A T C G
Reverse Opposite:
A T G C C G T A C T A G A G T C T C G A G T C A A G T C C T G A
p-value:1e-7
log p-value:-1.664e+01
Information Content per bp:1.825
Number of Target Sequences with motif981.0
Percentage of Target Sequences with motif8.23%
Number of Background Sequences with motif2542.8
Percentage of Background Sequences with motif6.96%
Average Position of motif in Targets103.1 +/- 55.5bp
Average Position of motif in Background99.1 +/- 58.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAV1(1)(AP2/EREBP)/Arabidopsis thaliana/AthaMap

Match Rank:1
Score:0.82
Offset:-4
Orientation:reverse strand
Alignment:----TGTTGCTG
NTTCTGTTGCNN
 A C G T A C G T A C G T A C G T A G C T A C T G A C G T A G C T A C T G A G T C C G A T A T C G
G A C T G C A T C G A T G T A C A C G T A C T G A C G T A C G T A C T G A T G C C G A T A C T G

RAV1/MA0582.1/Jaspar

Match Rank:2
Score:0.82
Offset:-4
Orientation:reverse strand
Alignment:----TGTTGCTG
NTTCTGTTGCNN
 A C G T A C G T A C G T A C G T A G C T A C T G A C G T A G C T A C T G A G T C C G A T A T C G
G A C T G C A T C G A T G T A C A C G T A C T G A C G T A C G T A C T G A T G C C G A T A C T G

Aef1/dmmpmm(Pollard)/fly

Match Rank:3
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TGTTGCTG
TGTTGTTG
 A G C T A C T G A C G T A G C T A C T G A G T C C G A T A T C G
C G A T A C T G A C G T C G A T A C T G A C G T A C G T A C T G

CRZ1(MacIsaac)/Yeast

Match Rank:4
Score:0.76
Offset:1
Orientation:forward strand
Alignment:TGTTGCTG
-GAGGCTG
 A G C T A C T G A C G T A G C T A C T G A G T C C G A T A T C G
A C G T A C T G C G A T A C T G A C T G A G T C A C G T A C T G

AT1G01250(AP2EREBP)/col-AT1G01250-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---TGTTGCTG-
WADTGTCGGTGR
 A C G T A C G T A C G T A G C T A C T G A C G T A G C T A C T G A G T C C G A T A T C G A C G T
G C A T G C T A C T A G A G C T A C T G C G A T A G T C A C T G A C T G A G C T A C T G T C A G

MET32/MA0334.1/Jaspar

Match Rank:6
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TGTTGCTG
TGTGGCG-
 A G C T A C T G A C G T A G C T A C T G A G T C C G A T A T C G
A C G T C T A G C A G T A C T G A C T G G A T C A C T G A C G T

ERF38(AP2EREBP)/col-ERF38-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TGTTGCTG
TGTCGGTG
 A G C T A C T G A C G T A G C T A C T G A G T C C G A T A T C G
G A C T A C T G C G A T A G T C A C T G A C T G A G C T C T A G

AT4G32800/MA1241.1/Jaspar

Match Rank:8
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTGCTG---
NNNNNTGTCGGTGGNN
 A C G T A C G T A C G T A C G T A C G T A G C T A C T G A C G T A G C T A C T G A G T C C G A T A T C G A C G T A C G T A C G T
C T A G C G T A G C T A C G T A C A G T G A C T A C T G C G A T A G T C A C T G A C T G A G C T C T A G T C A G G C T A C A T G

ERF38/MA1238.2/Jaspar

Match Rank:9
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TGTTGCTG--
NNNTGTCGGTGGN
 A C G T A C G T A C G T A G C T A C T G A C G T A G C T A C T G A G T C C G A T A T C G A C G T A C G T
G C A T C G A T C A G T G A C T C A T G C G A T G A T C C A T G C A T G G A C T C A T G C T A G G C A T

RAP2-1/MA1679.1/Jaspar

Match Rank:10
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----TGTTGCTG---
NNNATGTCGGTGGNN
 A C G T A C G T A C G T A C G T A G C T A C T G A C G T A G C T A C T G A G T C C G A T A T C G A C G T A C G T A C G T
C T A G G C T A C T G A C T G A C A G T C T A G C A G T A G T C C A T G A C T G G A C T C A T G T C A G G A T C C A T G