Information for 2-CGAAATCGAW (Motif 2)

G T A C T C A G C G T A C T G A G C T A A C G T A G T C T C A G G T C A C G T A
Reverse Opposite:
G C A T C A G T A G T C C T A G C G T A C G A T G A C T G C A T A G T C C A T G
p-value:1e-34
log p-value:-8.019e+01
Information Content per bp:1.599
Number of Target Sequences with motif3481.0
Percentage of Target Sequences with motif29.19%
Number of Background Sequences with motif8852.0
Percentage of Background Sequences with motif24.22%
Average Position of motif in Targets98.7 +/- 55.3bp
Average Position of motif in Background101.2 +/- 67.6bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ceh-28/MA1445.1/Jaspar

Match Rank:1
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:CGAAATCGAW--
--AAATCGATTT
 G T A C T C A G C G T A C T G A G C T A A C G T A G T C T C A G G T C A C G T A A C G T A C G T
A C G T A C G T G C T A C G T A T C G A A G C T G T A C A C T G C T G A A G C T G C A T C G A T

AT2G15740(C2H2)/col-AT2G15740-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CGAAATCGAW-
DHNDWATCGATD
 A C G T G T A C T C A G C G T A C T G A G C T A A C G T A G T C T C A G G T C A C G T A A C G T
C G A T G A T C T A C G C T G A G C T A C G T A G C A T A G T C C T A G C G T A G C A T C G A T

SPT23/SPT23_YPD/[](Harbison)/Yeast

Match Rank:3
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CGAAATCGAW
-GAAATCAA-
 G T A C T C A G C G T A C T G A G C T A A C G T A G T C T C A G G T C A C G T A
A C G T C T A G C T G A C T G A C G T A G A C T A T G C T G C A C T G A A C G T

SPT23(MacIsaac)/Yeast

Match Rank:4
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CGAAATCGAW
-GAAATCAA-
 G T A C T C A G C G T A C T G A G C T A A C G T A G T C T C A G G T C A C G T A
A C G T C T A G C T G A C T G A C G T A G A C T A T G C T G C A C T G A A C G T

SPT23/MA0388.1/Jaspar

Match Rank:5
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CGAAATCGAW
-GAAATCAA-
 G T A C T C A G C G T A C T G A G C T A A C G T A G T C T C A G G T C A C G T A
A C G T C T A G C G T A C T G A C G T A G A C T A T G C T G C A C T G A A C G T

ONECUT2/MA0756.1/Jaspar

Match Rank:6
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CGAAATCGAW---
AAAAAATCGATAAT
 A C G T G T A C T C A G C G T A C T G A G C T A A C G T A G T C T C A G G T C A C G T A A C G T A C G T A C G T
T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

AT5G22990(C2H2)/col-AT5G22990-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CGAAATCGAW-
WCGAHDTCGWHN
 A C G T G T A C T C A G C G T A C T G A G C T A A C G T A G T C T C A G G T C A C G T A A C G T
G C A T G A T C C T A G C G T A G C A T C G T A G C A T A G T C C T A G C G T A G C A T C G A T

AT1G20910(ARID)/col-AT1G20910-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CGAAATCGAW-
-THAATTRAWN
 G T A C T C A G C G T A C T G A G C T A A C G T A G T C T C A G G T C A C G T A A C G T
A C G T A G C T G C T A C T G A C G T A A C G T A G C T C T A G C T G A C G T A A G C T

XBP1/MA0414.1/Jaspar

Match Rank:9
Score:0.72
Offset:4
Orientation:forward strand
Alignment:CGAAATCGAW-
----CTCGAGA
 G T A C T C A G C G T A C T G A G C T A A C G T A G T C T C A G G T C A C G T A A C G T
A C G T A C G T A C G T A C G T G A T C A C G T A G T C A C T G C G T A T C A G T C A G

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:10
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CGAAATCGAW
HNRAATCAAT
 G T A C T C A G C G T A C T G A G C T A A C G T A G T C T C A G G T C A C G T A
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T