Information for 9-TRTATATATATA (Motif 12)

C A G T T C A G G A C T C T G A A C G T T C G A A G C T G C T A G C A T C G T A C G A T C T G A
Reverse Opposite:
A G C T C G T A G C A T C G T A C G A T C T G A A G C T C G T A A G C T C T G A A G T C G T C A
p-value:1e-17
log p-value:-3.977e+01
Information Content per bp:1.671
Number of Target Sequences with motif336.0
Percentage of Target Sequences with motif2.82%
Number of Background Sequences with motif623.9
Percentage of Background Sequences with motif1.71%
Average Position of motif in Targets101.4 +/- 55.5bp
Average Position of motif in Background97.8 +/- 54.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SeqBias: TA-repeat

Match Rank:1
Score:0.92
Offset:2
Orientation:forward strand
Alignment:TRTATATATATA
--TATATATATA
 C A G T T C A G G A C T C T G A A C G T T C G A A G C T G C T A G C A T C G T A C G A T C T G A
A C G T A C G T C G A T C G T A C G A T C G T A C G A T C G T A C G A T C G T A C G A T C G T A

PB0198.1_Zfp128_2/Jaspar

Match Rank:2
Score:0.86
Offset:0
Orientation:forward strand
Alignment:TRTATATATATA--
TGTATATATATACC
 C A G T T C A G G A C T C T G A A C G T T C G A A G C T G C T A G C A T C G T A C G A T C T G A A C G T A C G T
C A G T C A T G G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G A C T C G T A T G A C A T G C

Cf2/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.83
Offset:3
Orientation:forward strand
Alignment:TRTATATATATA
---GTATATATA
 C A G T T C A G G A C T C T G A A C G T T C G A A G C T G C T A G C A T C G T A C G A T C T G A
A C G T A C G T A C G T T C A G A G C T C T G A A G C T T C G A G A C T C T G A A G C T T C G A

PB0080.1_Tbp_1/Jaspar

Match Rank:4
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--TRTATATATATA--
NANTTATATATAANGN
 A C G T A C G T C A G T T C A G G A C T C T G A A C G T T C G A A G C T G C T A G C A T C G T A C G A T C T G A A C G T A C G T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

Cf2/MA0015.1/Jaspar

Match Rank:5
Score:0.83
Offset:3
Orientation:forward strand
Alignment:TRTATATATATA-
---GTATATATAC
 C A G T T C A G G A C T C T G A A C G T T C G A A G C T G C T A G C A T C G T A C G A T C T G A A C G T
A C G T A C G T A C G T T C A G A G C T T C G A A G C T G T C A A G C T T C G A G A C T C T G A A G T C

SPT15/MA0386.1/Jaspar

Match Rank:6
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--TRTATATATATA-------
NNNNAATATATATANCTANNN
 A C G T A C G T C A G T T C A G G A C T C T G A A C G T T C G A A G C T G C T A G C A T C G T A C G A T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C G A T A G T C A T C G G C T A G C T A G C A T C G T A G C A T G C T A G C A T G T C A G C A T C G T A G A C T A G T C G C A T C T G A C T A G C G A T A G T C

RBMS3(RRM)/Homo_sapiens-RNCMPT00173-PBM/HughesRNA

Match Rank:7
Score:0.78
Offset:2
Orientation:forward strand
Alignment:TRTATATATATA
--TATATAN---
 C A G T T C A G G A C T C T G A A C G T T C G A A G C T G C T A G C A T C G T A C G A T C T G A
A C G T A C G T G A C T C G T A A C G T C G T A C G A T C G T A A T C G A C G T A C G T A C G T

RBMS3(RRM)/Homo_sapiens-RNCMPT00057-PBM/HughesRNA

Match Rank:8
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:TRTATATATATA
--TATATAT---
 C A G T T C A G G A C T C T G A A C G T T C G A A G C T G C T A G C A T C G T A C G A T C T G A
A C G T A C G T A C G T T G C A A C G T C G T A A C G T C T G A A C G T A C G T A C G T A C G T

NHP6A/MA0345.1/Jaspar

Match Rank:9
Score:0.77
Offset:-6
Orientation:forward strand
Alignment:------TRTATATATATA---
ATGACCTATATATAAAAATGA
 A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C A G G A C T C T G A A C G T T C G A A G C T G C T A G C A T C G T A C G A T C T G A A C G T A C G T A C G T
T G C A G C A T C A T G G C T A G T A C G A T C G C A T G T C A G C A T C G T A G C A T C G T A G C A T C G T A C G T A C G T A C G T A C G T A G C A T C T A G G T C A

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:10
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--TRTATATATATA-
YATGCATATRCATRT
 A C G T A C G T C A G T T C A G G A C T C T G A A C G T T C G A A G C T G C T A G C A T C G T A C G A T C T G A A C G T
G A T C C G T A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T