Homer de novo Motif Results (08-homer/control_consensus/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 12557
Total background sequences = 35826
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 G T C A G C A T C G A T C T A G A C T G A C T G A C T G A G C T A C G T G C T A 1e-157-3.627e+0224.72%15.48%55.7bp (65.4bp)TRP2(MYBrelated)/colamp-TRP2-DAP-Seq(GSE60143)/Homer(0.813)
More Information | Similar Motifs Found		motif file (matrix)
2 A G T C C G A T T A C G C G A T C T A G G C A T G T C A C A G T C G T A C G T A 1e-87-2.005e+0213.24%8.03%52.8bp (59.1bp)Cf2-II/dmmpmm(Pollard)/fly(0.851)
More Information | Similar Motifs Found		motif file (matrix)
3 C T G A G A T C C T G A C T G A G A T C A C T G T C A G G T A C A C T G C T G A 1e-73-1.682e+0234.99%27.58%54.5bp (68.9bp)CRF10(AP2EREBP)/col100-CRF10-DAP-Seq(GSE60143)/Homer(0.808)
More Information | Similar Motifs Found		motif file (matrix)
4 C A T G G C T A G A C T A G T C G A T C A C T G G T C A A C G T A G T C C A G T 1e-73-1.682e+0235.07%27.65%55.5bp (68.5bp)GATA19/MA1323.1/Jaspar(0.843)
More Information | Similar Motifs Found		motif file (matrix)
5 A C G T A G T C A C G T A C G T A G T C A C G T G A C T A G T C 1e-61-1.417e+0227.28%21.04%55.3bp (71.3bp)TRA2(RRM)/Drosophila_melanogaster-RNCMPT00078-PBM/HughesRNA(0.854)
More Information | Similar Motifs Found		motif file (matrix)
6 A G C T A T G C T C G A C G T A C G A T A C G T A G C T T A G C T C G A T G C A 1e-55-1.267e+0225.25%19.51%55.9bp (67.0bp)CG17838(RRM)/Drosophila_melanogaster-RNCMPT00131-PBM/HughesRNA(0.786)
More Information | Similar Motifs Found		motif file (matrix)
7 G A T C C G A T T A G C G C A T T A G C C A G T T A G C G A C T 1e-54-1.262e+0246.81%39.91%55.4bp (68.7bp)Trl/MA0205.2/Jaspar(0.920)
More Information | Similar Motifs Found		motif file (matrix)
8 G A T C C G A T A T C G C G A T C A T G A G C T C G T A T C A G C G A T C T A G 1e-48-1.124e+0226.45%20.93%56.3bp (58.5bp)RBM28(RRM)/Homo_sapiens-RNCMPT00049-PBM/HughesRNA(0.751)
More Information | Similar Motifs Found		motif file (matrix)
9 G T A C C G A T A T G C A G C T C A T G G A T C C G A T A G T C 1e-42-9.710e+0131.33%25.87%56.2bp (63.5bp)REF6(Zf)/Arabidopsis-REF6-ChIP-Seq(GSE106942)/Homer(0.781)
More Information | Similar Motifs Found		motif file (matrix)
10 T C A G C G T A A C T G T G A C A G C T G C A T C G T A C T A G 1e-31-7.226e+0120.97%16.92%55.7bp (63.1bp)bcd-1/dmmpmm(Noyes)/fly(0.842)
More Information | Similar Motifs Found		motif file (matrix)
11 G C T A G A T C G C T A G T A C G C T A T G A C G C T A T G A C G C T A G T A C 1e-27-6.299e+0121.25%17.45%55.8bp (59.9bp)SeqBias: CA-repeat(0.896)
More Information | Similar Motifs Found		motif file (matrix)
12 G A C T C A G T A C T G C T G A G C A T A G C T A C T G G T C A C G A T G A C T 1e-25-5.820e+012.48%1.29%58.1bp (60.9bp)PBX1/MA0070.1/Jaspar(0.921)
More Information | Similar Motifs Found		motif file (matrix)
13 C G A T C G T A C T A G A C G T A G T C C G T A C G T A G T A C 1e-23-5.485e+0112.88%10.05%57.4bp (64.8bp)WRKY75(WRKY)/col-WRKY75-DAP-Seq(GSE60143)/Homer(0.957)
More Information | Similar Motifs Found		motif file (matrix)
14 A G T C A G T C A G T C A C G T C G T A C G T A A C G T A G T C 1e-21-5.050e+011.47%0.65%57.7bp (65.5bp)oc/dmmpmm(Bergman)/fly(0.813)
More Information | Similar Motifs Found		motif file (matrix)
15 A T G C C T A G T A G C T A C G G A C T A C T G C T G A G T A C C A G T T G A C A C T G A T G C 1e-15-3.650e+010.14%0.01%55.0bp (34.3bp)BAS1/BAS1_SM/2-BAS1(Harbison)/Yeast(0.738)
More Information | Similar Motifs Found		motif file (matrix)
16 C G T A A C G T C T G A A C T G A C T G A G T C A G T C A T G C 1e-15-3.463e+013.83%2.62%57.9bp (61.3bp)PCF/Arabidopsis-Promoters/Homer(0.802)
More Information | Similar Motifs Found		motif file (matrix)
17 T G C A T A C G G A T C A G C T A C G T C T G A T C G A G C A T G A C T C G A T G A T C A C T G 1e-14-3.279e+010.16%0.02%42.8bp (6.2bp)SPT23/MA0388.1/Jaspar(0.758)
More Information | Similar Motifs Found		motif file (matrix)
18 A C G T C G T A A T G C A C G T C G T A C G A T C G T A A T C G C G A T G C T A A C G T C G T A 1e-13-3.165e+010.14%0.01%44.2bp (7.9bp)AT1G04880(ARID)/colamp-AT1G04880-DAP-Seq(GSE60143)/Homer(0.680)
More Information | Similar Motifs Found		motif file (matrix)
19 A G T C A C G T C G T A A C G T C G T A A G T C A G T C A C G T A T G C A C G T 1e-13-3.035e+010.15%0.02%51.0bp (22.1bp)ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer(0.624)
More Information | Similar Motifs Found		motif file (matrix)
20 T C A G T G A C A T C G A T G C T G C A T A C G A C T G C T G A A G C T G C T A 1e-12-2.936e+010.09%0.01%55.0bp (14.5bp)DAL82/MA0291.1/Jaspar(0.681)
More Information | Similar Motifs Found		motif file (matrix)
21 C G T A A G T C A C G T C G T A A C T G A G T C A C G T A G T C A C T G A C T G C G T A C G T A 1e-12-2.783e+010.10%0.01%60.3bp (15.4bp)CEP3/MA0282.1/Jaspar(0.736)
More Information | Similar Motifs Found		motif file (matrix)
22 * A C T G C G T A A C G T A C G T C G T A A C T G A G T C C G T A A G T C C G T A 1e-8-1.930e+010.08%0.01%49.0bp (37.4bp)NCU08034(RRM)/Neurospora_crassa-RNCMPT00209-PBM/HughesRNA(0.783)
More Information | Similar Motifs Found		motif file (matrix)
23 * A G T C A C G T A G T C A C G T A C T G A C T G A C G T A C T G A C G T A C G T 1e-8-1.862e+010.13%0.02%53.9bp (38.8bp)ZNF317/MA1593.1/Jaspar(0.720)
More Information | Similar Motifs Found		motif file (matrix)
24 * A G C T G T A C C G A T A C G T A G T C T A C G A G C T G C A T C G A T A C G T A G T C C G A T 1e-6-1.382e+010.53%0.28%55.6bp (68.8bp)PH0044.1_Homez/Jaspar(0.693)
More Information | Similar Motifs Found		motif file (matrix)
25 * A C T G A C G T A C G T A G T C A C G T A G T C A C T G A G T C A C G T A G T C 1e-5-1.293e+010.09%0.01%54.0bp (21.5bp)Clamp/MA1700.1/Jaspar(0.752)
More Information | Similar Motifs Found		motif file (matrix)
26 * A C G T A G T C A C T G C G T A A C G T A C G T A G T C A C G T C G T A A G T C 1e-4-9.475e+000.10%0.03%58.5bp (58.0bp)AT1G49560(G2like)/colamp-AT1G49560-DAP-Seq(GSE60143)/Homer(0.691)
More Information | Similar Motifs Found		motif file (matrix)