Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 468)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 46974)	% of Background Sequences with Motif
TBP3(MYBrelated)/col-TBP3-DAP-Seq(GSE60143)/Homer	VYTAGGGCAN	1e-53	-1.237e+02	0.0000	156.0	33.33%	3800.2	8.09%
LBD18(LOBAS2)/colamp-LBD18-DAP-Seq(GSE60143)/Homer	CKGAWWTTCHGS	1e-51	-1.187e+02	0.0000	286.0	61.11%	12872.7	27.41%
AT1G72740(MYBrelated)/colamp-AT1G72740-DAP-Seq(GSE60143)/Homer	NNWWAMCCTAAHWNN	1e-46	-1.081e+02	0.0000	182.0	38.89%	5820.1	12.39%
COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer	GKBCARAGGTCA	1e-38	-8.799e+01	0.0000	130.0	27.78%	3575.2	7.61%
WRKY45(WRKY)/col-WRKY45-DAP-Seq(GSE60143)/Homer	HNNNKTTGACTWWNH	1e-37	-8.637e+01	0.0000	104.0	22.22%	2317.7	4.94%
WRKY28(WRKY)/col-WRKY28-DAP-Seq(GSE60143)/Homer	BGTTGACTWH	1e-37	-8.598e+01	0.0000	182.0	38.89%	6834.9	14.56%
WRKY71(WRKY)/col-WRKY71-DAP-Seq(GSE60143)/Homer	CKTTGACYWW	1e-34	-7.830e+01	0.0000	130.0	27.78%	3936.0	8.38%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e-33	-7.807e+01	0.0000	182.0	38.89%	7256.9	15.45%
Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer	GGYAATGAAA	1e-31	-7.235e+01	0.0000	104.0	22.22%	2741.0	5.84%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e-31	-7.197e+01	0.0000	234.0	50.00%	11609.2	24.72%
WRKY14(WRKY)/colamp-WRKY14-DAP-Seq(GSE60143)/Homer	NCGTTGACTTTN	1e-31	-7.140e+01	0.0000	104.0	22.22%	2772.3	5.90%
WRKY26(WRKY)/colamp-WRKY26-DAP-Seq(GSE60143)/Homer	CGTTGACTWDKN	1e-30	-6.958e+01	0.0000	104.0	22.22%	2835.6	6.04%
WRKY33(WRKY)/col-WRKY33-DAP-Seq(GSE60143)/Homer	CGTTGACYAW	1e-29	-6.746e+01	0.0000	130.0	27.78%	4398.8	9.37%
WRKY8(WRKY)/colamp-WRKY8-DAP-Seq(GSE60143)/Homer	CGTTGACTTT	1e-28	-6.643e+01	0.0000	52.0	11.11%	670.3	1.43%
WRKY21(WRKY)/colamp-WRKY21-DAP-Seq(GSE60143)/Homer	DCGTTGACTTTT	1e-28	-6.514e+01	0.0000	52.0	11.11%	689.3	1.47%
WRKY6(WRKY)/colamp-WRKY6-DAP-Seq(GSE60143)/Homer	NCGTTGACTWWD	1e-27	-6.252e+01	0.0000	130.0	27.78%	4634.9	9.87%
WRKY40(WRKY)/colamp-WRKY40-DAP-Seq(GSE60143)/Homer	AHWAGTCAAC	1e-27	-6.220e+01	0.0000	104.0	22.22%	3110.8	6.62%
AT1G76870(Trihelix)/col-AT1G76870-DAP-Seq(GSE60143)/Homer	AAAACCRGWW	1e-26	-6.164e+01	0.0000	104.0	22.22%	3132.4	6.67%
WRKY27(WRKY)/colamp-WRKY27-DAP-Seq(GSE60143)/Homer	NHGTTGACYTWD	1e-26	-6.075e+01	0.0000	130.0	27.78%	4724.0	10.06%
WRKY17(WRKY)/colamp-WRKY17-DAP-Seq(GSE60143)/Homer	GCGTTGACTTTT	1e-25	-5.947e+01	0.0000	26.0	5.56%	115.1	0.25%
LBD19(LOBAS2)/colamp-LBD19-DAP-Seq(GSE60143)/Homer	CCKGAAWTTCMGGAW	1e-25	-5.923e+01	0.0000	182.0	38.89%	8434.5	17.96%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e-25	-5.872e+01	0.0000	78.0	16.67%	1884.6	4.01%
At1g49010(MYBrelated)/col-At1g49010-DAP-Seq(GSE60143)/Homer	RGATAASNTT	1e-25	-5.774e+01	0.0000	208.0	44.44%	10577.8	22.53%
AT2G20400(G2like)/colamp-AT2G20400-DAP-Seq(GSE60143)/Homer	DNVGAATATTCBNHN	1e-24	-5.730e+01	0.0000	52.0	11.11%	819.7	1.75%
WRKY11(WRKY)/col-WRKY11-DAP-Seq(GSE60143)/Homer	SCGTTGACTTTN	1e-24	-5.574e+01	0.0000	52.0	11.11%	848.0	1.81%
WRKY75(WRKY)/col-WRKY75-DAP-Seq(GSE60143)/Homer	CGTTGACTWW	1e-23	-5.447e+01	0.0000	130.0	27.78%	5060.9	10.78%
WRKY50(WRKY)/col-WRKY50-DAP-Seq(GSE60143)/Homer	NNTTGACTWNNGNNN	1e-23	-5.362e+01	0.0000	130.0	27.78%	5108.1	10.88%
WRKY43(WRKY)/colamp-WRKY43-DAP-Seq(GSE60143)/Homer	NCGTTGACTTTT	1e-22	-5.264e+01	0.0000	78.0	16.67%	2081.2	4.43%
WRKY15(WRKY)/col-WRKY15-DAP-Seq(GSE60143)/Homer	VGTTGACTWW	1e-22	-5.180e+01	0.0000	130.0	27.78%	5214.1	11.10%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e-22	-5.113e+01	0.0000	26.0	5.56%	161.4	0.34%
At1g19000(MYBrelated)/colamp-At1g19000-DAP-Seq(GSE60143)/Homer	WWTGGATAADDT	1e-21	-4.896e+01	0.0000	130.0	27.78%	5386.1	11.47%
WRKY29(WRKY)/colamp-WRKY29-DAP-Seq(GSE60143)/Homer	MGTTGACTTT	1e-20	-4.812e+01	0.0000	130.0	27.78%	5439.0	11.58%
WRKY31(WRKY)/colamp-WRKY31-DAP-Seq(GSE60143)/Homer	NCGTTGACTWWK	1e-20	-4.770e+01	0.0000	104.0	22.22%	3766.8	8.02%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e-20	-4.768e+01	0.0000	130.0	27.78%	5466.4	11.64%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e-20	-4.646e+01	0.0000	26.0	5.56%	195.1	0.42%
At5g47390(MYBrelated)/col-At5g47390-DAP-Seq(GSE60143)/Homer	CTTATCCA	1e-20	-4.610e+01	0.0000	156.0	33.33%	7441.8	15.85%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e-20	-4.609e+01	0.0000	26.0	5.56%	198.6	0.42%
SFP1/SacCer-Promoters/Homer	DDAAAAATTTTY	1e-19	-4.597e+01	0.0000	26.0	5.56%	199.0	0.42%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e-19	-4.584e+01	0.0000	156.0	33.33%	7461.9	15.89%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e-19	-4.573e+01	0.0000	52.0	11.11%	1067.3	2.27%
WRKY55(WRKY)/col-WRKY55-DAP-Seq(GSE60143)/Homer	NCGTTGACTT	1e-19	-4.513e+01	0.0000	130.0	27.78%	5632.7	12.00%
Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer	TTTTATGGCM	1e-19	-4.478e+01	0.0000	208.0	44.44%	11704.4	24.93%
WRKY20(WRKY)/col-WRKY20-DAP-Seq(GSE60143)/Homer	CKTTGACYWD	1e-18	-4.373e+01	0.0000	104.0	22.22%	3980.7	8.48%
PSE(SNAPc)/K562-mStart-Seq/Homer	WAVTCACCMTAASYDAAAAG	1e-18	-4.286e+01	0.0000	78.0	16.67%	2459.4	5.24%
Zelda(Zf)/Embryo-zld-ChIP-Seq(GSE65441)/Homer	KBCTACCTGW	1e-18	-4.182e+01	0.0000	52.0	11.11%	1171.3	2.49%
RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer	TTGAMCTTTG	1e-18	-4.147e+01	0.0000	182.0	38.89%	9860.5	21.00%
GBF3(bZIP)/Arabidopsis-GBF3-ChIP-Seq(GSE80564)/Homer	TGCCACGTSAYC	1e-17	-3.965e+01	0.0000	78.0	16.67%	2604.3	5.55%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e-16	-3.684e+01	0.0000	26.0	5.56%	292.9	0.62%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e-15	-3.645e+01	0.0000	26.0	5.56%	297.3	0.63%
GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer	CTCCCTGGGAGGCCN	1e-15	-3.616e+01	0.0000	52.0	11.11%	1345.1	2.86%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e-15	-3.577e+01	0.0000	104.0	22.22%	4470.3	9.52%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e-15	-3.568e+01	0.0000	26.0	5.56%	307.3	0.65%
AT5G61620(MYBrelated)/colamp-AT5G61620-DAP-Seq(GSE60143)/Homer	CTTATCCA	1e-15	-3.538e+01	0.0000	156.0	33.33%	8342.1	17.77%
At2g03500(G2like)/col-At2g03500-DAP-Seq(GSE60143)/Homer	WWAGAATATTCT	1e-15	-3.522e+01	0.0000	52.0	11.11%	1377.6	2.93%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e-15	-3.514e+01	0.0000	52.0	11.11%	1380.8	2.94%
WRKY24(WRKY)/colamp-WRKY24-DAP-Seq(GSE60143)/Homer	CGTTGACTWW	1e-15	-3.508e+01	0.0000	104.0	22.22%	4517.4	9.62%
WRKY65(WRKY)/colamp-WRKY65-DAP-Seq(GSE60143)/Homer	AWWWAGTCAACG	1e-15	-3.492e+01	0.0000	78.0	16.67%	2840.9	6.05%
At5g29000(G2like)/col-At5g29000-DAP-Seq(GSE60143)/Homer	RGAATATTCYHH	1e-14	-3.337e+01	0.0000	52.0	11.11%	1443.7	3.07%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e-14	-3.247e+01	0.0000	26.0	5.56%	353.6	0.75%
At1g25550(G2like)/colamp-At1g25550-DAP-Seq(GSE60143)/Homer	NAGATTCY	1e-13	-3.200e+01	0.0000	130.0	27.78%	6636.8	14.13%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e-13	-3.121e+01	0.0000	52.0	11.11%	1526.4	3.25%
BOS1(MYB)/col-BOS1-DAP-Seq(GSE60143)/Homer	NNRCCTAACT	1e-13	-3.119e+01	0.0000	104.0	22.22%	4797.9	10.22%
WRKY22(WRKY)/colamp-WRKY22-DAP-Seq(GSE60143)/Homer	WWAAAGTCAACK	1e-13	-3.098e+01	0.0000	78.0	16.67%	3062.8	6.52%
At1g68670(G2like)/colamp-At1g68670-DAP-Seq(GSE60143)/Homer	WNWWHNRAAGATTCT	1e-13	-3.048e+01	0.0000	78.0	16.67%	3092.7	6.59%
bZIP44(bZIP)/colamp-bZIP44-DAP-Seq(GSE60143)/Homer	NDTGCCACGTCAGCH	1e-13	-3.021e+01	0.0000	26.0	5.56%	390.5	0.83%
RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer	AAWCTAGGTCARDNN	1e-12	-2.987e+01	0.0000	26.0	5.56%	396.9	0.85%
LIN-39(Homeobox)/cElegans.L3-LIN39-ChIP-Seq(modEncode)/Homer	ATGATTRATG	1e-12	-2.933e+01	0.0000	130.0	27.78%	6880.2	14.65%
WRKY47(WRKY)/colamp-WRKY47-DAP-Seq(GSE60143)/Homer	WAAGTCAACGBT	1e-12	-2.931e+01	0.0000	52.0	11.11%	1604.4	3.42%
AT3G42860(zfGRF)/col-AT3G42860-DAP-Seq(GSE60143)/Homer	CGTTGACTTN	1e-12	-2.924e+01	0.0000	52.0	11.11%	1607.2	3.42%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e-12	-2.829e+01	0.0000	26.0	5.56%	425.6	0.91%
ARF16(ARF)/col-ARF16-DAP-Seq(GSE60143)/Homer	ATTTTACGAT	1e-12	-2.796e+01	0.0000	52.0	11.11%	1663.1	3.54%
Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer	NANTGCSGCA	1e-11	-2.741e+01	0.0000	52.0	11.11%	1688.5	3.60%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e-11	-2.713e+01	0.0000	26.0	5.56%	448.4	0.95%
MYB4(MYB)/col200-MYB4-DAP-Seq(GSE60143)/Homer	WAGKTAGGTARR	1e-11	-2.693e+01	0.0000	78.0	16.67%	3319.3	7.07%
WRKY30(WRKY)/colamp-WRKY30-DAP-Seq(GSE60143)/Homer	CGTTGACTTN	1e-11	-2.663e+01	0.0000	52.0	11.11%	1724.4	3.67%
Knotted(Homeobox)/Corn-KN1-ChIP-Seq(GSE39161)/Homer	GAYGNGACRGGN	1e-11	-2.637e+01	0.0000	130.0	27.78%	7171.5	15.27%
EIL4(EIL)/Tomato-EIL4-ChIP-Seq(GSE116581)/Homer	GATTCAWTGAAT	1e-11	-2.623e+01	0.0000	26.0	5.56%	467.8	1.00%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e-11	-2.604e+01	0.0000	26.0	5.56%	471.8	1.00%
WRKY3(WRKY)/col-WRKY3-DAP-Seq(GSE60143)/Homer	NCKTTGACYDDN	1e-10	-2.497e+01	0.0000	78.0	16.67%	3457.9	7.36%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e-10	-2.439e+01	0.0000	130.0	27.78%	7379.2	15.71%
AT5G56840(MYBrelated)/colamp-AT5G56840-DAP-Seq(GSE60143)/Homer	TGGATAAGGT	1e-10	-2.412e+01	0.0000	130.0	27.78%	7408.7	15.78%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e-10	-2.373e+01	0.0000	156.0	33.33%	9591.0	20.42%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e-10	-2.336e+01	0.0000	78.0	16.67%	3577.5	7.62%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e-10	-2.323e+01	0.0000	26.0	5.56%	537.9	1.15%
Duxbl(Homeobox)/NIH3T3-Duxbl.HA-ChIP-Seq(GSE119782)/Homer	TAAYCYAATCAA	1e-10	-2.311e+01	0.0000	26.0	5.56%	540.0	1.15%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e-10	-2.304e+01	0.0000	104.0	22.22%	5495.0	11.70%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e-9	-2.298e+01	0.0000	78.0	16.67%	3606.1	7.68%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e-9	-2.290e+01	0.0000	104.0	22.22%	5508.8	11.73%
AT4G00250(GeBP)/col-AT4G00250-DAP-Seq(GSE60143)/Homer	WDTGGATAAKRT	1e-9	-2.279e+01	0.0000	78.0	16.67%	3621.9	7.71%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e-9	-2.246e+01	0.0000	26.0	5.56%	557.5	1.19%
CELF2(RRM)/JSL1-CELF2-CLIP-Seq(GSE71264)/Homer	RGTGTCAG	1e-9	-2.231e+01	0.0000	26.0	5.56%	561.9	1.20%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e-9	-2.231e+01	0.0000	182.0	38.89%	12025.5	25.61%
Unknown3/Arabidopsis-Promoters/Homer	AYTAAACCGG	1e-9	-2.219e+01	0.0000	78.0	16.67%	3669.4	7.81%
HDG7(HB)/col-HDG7-DAP-Seq(GSE60143)/Homer	WGCATTTAATGC	1e-9	-2.194e+01	0.0000	26.0	5.56%	571.8	1.22%
CAMTA5(CAMTA)/col-CAMTA5-DAP-Seq(GSE60143)/Homer	ACGCGTTTTANACRC	1e-9	-2.101e+01	0.0000	52.0	11.11%	2022.7	4.31%
MYB61(MYB)/colamp-MYB61-DAP-Seq(GSE60143)/Homer	HCYACCTACC	1e-9	-2.094e+01	0.0000	130.0	27.78%	7774.7	16.56%
ABF2(bZIP)/col-ABF2-DAP-Seq(GSE60143)/Homer	KGMCACGTGDCMHHH	1e-9	-2.075e+01	0.0000	52.0	11.11%	2039.0	4.34%
Dorsal(RHD)/Embryo-dl-ChIP-Seq(GSE65441)/Homer	GGGAAAAMCCCG	1e-8	-2.048e+01	0.0000	26.0	5.56%	613.6	1.31%
SRS7(SRS)/colamp-SRS7-DAP-Seq(GSE60143)/Homer	HATAGGTTTH	1e-8	-2.030e+01	0.0000	182.0	38.89%	12318.3	26.23%
AT4G37180(G2like)/col-AT4G37180-DAP-Seq(GSE60143)/Homer	AGAATCTTNN	1e-8	-2.026e+01	0.0000	130.0	27.78%	7858.3	16.74%
WRKY46(WRKY)/colamp-WRKY46-DAP-Seq(GSE60143)/Homer	AAAGTCAACGSN	1e-8	-2.025e+01	0.0000	26.0	5.56%	620.1	1.32%
EIN3(EIL)/col-EIN3-DAP-Seq(GSE60143)/Homer	ARATTCAATGWATYT	1e-8	-1.989e+01	0.0000	26.0	5.56%	631.8	1.35%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e-8	-1.982e+01	0.0000	78.0	16.67%	3868.5	8.24%
GBF6(bZIP)/colamp-GBF6-DAP-Seq(GSE60143)/Homer	WWTGMCACGTCABCW	1e-8	-1.968e+01	0.0000	52.0	11.11%	2104.0	4.48%
WRKY42(WRKY)/colamp-WRKY42-DAP-Seq(GSE60143)/Homer	NAAAGTCAACGN	1e-8	-1.960e+01	0.0000	52.0	11.11%	2109.3	4.49%
At3g11280(MYBrelated)/col-At3g11280-DAP-Seq(GSE60143)/Homer	GATAAGRT	1e-8	-1.911e+01	0.0000	104.0	22.22%	5903.4	12.57%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e-8	-1.905e+01	0.0000	26.0	5.56%	658.0	1.40%
AIL7(AP2EREBP)/colamp-AIL7-DAP-Seq(GSE60143)/Homer	KCACRAWTYYCGAGG	1e-8	-1.899e+01	0.0000	52.0	11.11%	2149.9	4.58%
TATA-box/SacCer-Promoters/Homer	BBHWTATATA	1e-8	-1.890e+01	0.0000	78.0	16.67%	3951.1	8.41%
Unknown1/Arabidopsis-Promoters/Homer	RGGGTAWWWTHGTAA	1e-8	-1.887e+01	0.0000	26.0	5.56%	664.8	1.42%
AGL63(MADS)/col-AGL63-DAP-Seq(GSE60143)/Homer	TTCCAAWWWTGG	1e-8	-1.886e+01	0.0000	78.0	16.67%	3955.4	8.42%
dof24(C2C2dof)/col-dof24-DAP-Seq(GSE60143)/Homer	TWMCTTTTTG	1e-8	-1.885e+01	0.0000	130.0	27.78%	8037.5	17.12%
AT5G59990(C2C2COlike)/colamp-AT5G59990-DAP-Seq(GSE60143)/Homer	TCTCAACCGTTCATT	1e-8	-1.884e+01	0.0000	26.0	5.56%	665.8	1.42%
ABF1/SacCer-Promoters/Homer	CGTRNAAARTGA	1e-7	-1.834e+01	0.0000	52.0	11.11%	2192.1	4.67%
MYB93(MYB)/colamp-MYB93-DAP-Seq(GSE60143)/Homer	GGTAGGTGRD	1e-7	-1.788e+01	0.0000	104.0	22.22%	6044.2	12.87%
WRKY25(WRKY)/colamp-WRKY25-DAP-Seq(GSE60143)/Homer	NNNNHRGTCAAMNNN	1e-7	-1.787e+01	0.0000	104.0	22.22%	6045.8	12.88%
dof42(C2C2dof)/col-dof42-DAP-Seq(GSE60143)/Homer	AAAAAGGC	1e-7	-1.726e+01	0.0000	52.0	11.11%	2268.9	4.83%
ZML2(C2C2gata)/col-ZML2-DAP-Seq(GSE60143)/Homer	CATCATCATC	1e-7	-1.687e+01	0.0000	52.0	11.11%	2297.0	4.89%
SeqBias: CG bias	SSSSSSSSSS	1e-7	-1.686e+01	0.0000	338.0	72.22%	28321.0	60.31%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e-7	-1.672e+01	0.0000	78.0	16.67%	4161.9	8.86%
HSFA6B(HSF)/colamp-HSFA6B-DAP-Seq(GSE60143)/Homer	NTTCTAGAANHTTCT	1e-7	-1.669e+01	0.0000	52.0	11.11%	2309.5	4.92%
WRKY18(WRKY)/col-WRKY18-DAP-Seq(GSE60143)/Homer	NNNTTGACYWNNNNN	1e-7	-1.658e+01	0.0000	130.0	27.78%	8347.3	17.78%
O2(bZIP)/Corn-O2-ChIP-Seq(GSE63991)/Homer	GCTGACGTGGCA	1e-7	-1.630e+01	0.0000	26.0	5.56%	757.1	1.61%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e-7	-1.627e+01	0.0000	78.0	16.67%	4207.6	8.96%
CRF10(AP2EREBP)/col100-CRF10-DAP-Seq(GSE60143)/Homer	DCCGCCGYHA	1e-6	-1.600e+01	0.0000	130.0	27.78%	8431.5	17.96%
At5g05790(MYBrelated)/col-At5g05790-DAP-Seq(GSE60143)/Homer	AYCTTATC	1e-6	-1.580e+01	0.0000	104.0	22.22%	6300.4	13.42%
Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer	NHRTCACGACDN	1e-6	-1.572e+01	0.0000	104.0	22.22%	6310.9	13.44%
TOD6?/SacCer-Promoters/Homer	GCGATGAGMT	1e-6	-1.571e+01	0.0000	26.0	5.56%	781.1	1.66%
SeqBias: TA-repeat	TATATATATA	1e-6	-1.564e+01	0.0000	182.0	38.89%	13078.7	27.85%
AT2G40260(G2like)/colamp-AT2G40260-DAP-Seq(GSE60143)/Homer	WAAAYATTCTTT	1e-6	-1.560e+01	0.0000	130.0	27.78%	8490.5	18.08%
ANL2(HB)/col-ANL2-DAP-Seq(GSE60143)/Homer	CATTAATTGC	1e-6	-1.554e+01	0.0000	52.0	11.11%	2397.7	5.11%
bZIP28(bZIP)/col-bZIP28-DAP-Seq(GSE60143)/Homer	TGCCACGTSABH	1e-6	-1.548e+01	0.0000	52.0	11.11%	2402.4	5.12%
ANAC013(NAC)/col-ANAC013-DAP-Seq(GSE60143)/Homer	CTTGNNNNNCAAGNA	1e-6	-1.542e+01	0.0000	52.0	11.11%	2407.9	5.13%
LOB(LOBAS2)/col-LOB-DAP-Seq(GSE60143)/Homer	CGCCGKAWWTTHCGS	1e-6	-1.540e+01	0.0000	52.0	11.11%	2408.4	5.13%
GBF5(bZIP)/colamp-GBF5-DAP-Seq(GSE60143)/Homer	WKNWSACGTGGCAWN	1e-6	-1.522e+01	0.0000	52.0	11.11%	2423.0	5.16%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e-6	-1.511e+01	0.0000	182.0	38.89%	13174.6	28.06%
HAT5(Homeobox)/colamp-HAT5-DAP-Seq(GSE60143)/Homer	DCAATWATTG	1e-6	-1.509e+01	0.0000	26.0	5.56%	807.0	1.72%
REB1/SacCer-Promoters/Homer	KCCGGGTAAYRR	1e-6	-1.507e+01	0.0000	26.0	5.56%	808.1	1.72%
ATHB20(Homeobox)/colamp-ATHB20-DAP-Seq(GSE60143)/Homer	CAATHATT	1e-6	-1.504e+01	0.0000	52.0	11.11%	2437.6	5.19%
EMB1789(C3H)/col-EMB1789-DAP-Seq(GSE60143)/Homer	TWTTTACCGYND	1e-6	-1.502e+01	0.0000	52.0	11.11%	2439.3	5.19%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e-6	-1.495e+01	0.0000	78.0	16.67%	4349.6	9.26%
At5g08520(MYBrelated)/colamp-At5g08520-DAP-Seq(GSE60143)/Homer	ADBSTTATCY	1e-6	-1.494e+01	0.0000	104.0	22.22%	6413.6	13.66%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e-6	-1.487e+01	0.0000	78.0	16.67%	4357.2	9.28%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e-6	-1.475e+01	0.0000	156.0	33.33%	10891.8	23.20%
MYB63(MYB)/col-MYB63-DAP-Seq(GSE60143)/Homer	BHYACCWACCHH	1e-6	-1.449e+01	0.0000	52.0	11.11%	2483.4	5.29%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e-6	-1.437e+01	0.0000	26.0	5.56%	839.2	1.79%
bZIP16(bZIP)/colamp-bZIP16-DAP-Seq(GSE60143)/Homer	TGCCACGTGD	1e-6	-1.433e+01	0.0000	52.0	11.11%	2496.2	5.32%
AT1G04880(ARID)/colamp-AT1G04880-DAP-Seq(GSE60143)/Homer	AAACTATATADTATA	1e-6	-1.418e+01	0.0000	26.0	5.56%	848.8	1.81%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e-6	-1.411e+01	0.0000	78.0	16.67%	4444.5	9.46%
AZF1(C2H2)/colamp-AZF1-DAP-Seq(GSE60143)/Homer	DKSWCACT	1e-6	-1.407e+01	0.0000	234.0	50.00%	18282.4	38.93%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e-6	-1.403e+01	0.0000	26.0	5.56%	855.6	1.82%
ATHB6(Homeobox)/Arabidopsis-HB6-ChIP-Seq(GSE80564)/Homer	CAATNATTBN	1e-6	-1.400e+01	0.0000	78.0	16.67%	4457.6	9.49%
At4g18890(BZR)/col-At4g18890-DAP-Seq(GSE60143)/Homer	NDBRCACGTGYR	1e-6	-1.394e+01	0.0000	26.0	5.56%	860.0	1.83%
HSF3(HSF)/colamp-HSF3-DAP-Seq(GSE60143)/Homer	NTTCTAGAAKCTTCT	1e-6	-1.384e+01	0.0000	78.0	16.67%	4475.5	9.53%
Unknown2/Arabidopsis-Promoters/Homer	AAACGACGTCGTTTT	1e-5	-1.375e+01	0.0000	26.0	5.56%	868.4	1.85%
HDG1(Homeobox)/col100-HDG1-DAP-Seq(GSE60143)/Homer	DDYAATTAATGH	1e-5	-1.343e+01	0.0000	52.0	11.11%	2575.3	5.48%
Unknown4/Arabidopsis-Promoters/Homer	CKTCKTCTTY	1e-5	-1.342e+01	0.0000	130.0	27.78%	8833.9	18.81%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e-5	-1.312e+01	0.0000	130.0	27.78%	8883.7	18.92%
BAM8(BES1)/col-BAM8-DAP-Seq(GSE60143)/Homer	NNWSACACGTGTSWN	1e-5	-1.289e+01	0.0000	26.0	5.56%	911.1	1.94%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e-5	-1.279e+01	0.0000	26.0	5.56%	916.8	1.95%
AS2(LOBAS2)/col-AS2-DAP-Seq(GSE60143)/Homer	CCGDAAWWHMCGSCG	1e-5	-1.275e+01	0.0000	26.0	5.56%	918.5	1.96%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e-5	-1.275e+01	0.0000	52.0	11.11%	2637.4	5.62%
AREB3(bZIP)/col-AREB3-DAP-Seq(GSE60143)/Homer	NKGMCACGTGDCMNN	1e-5	-1.211e+01	0.0000	52.0	11.11%	2699.0	5.75%
AT3G51470(DBP)/col-AT3G51470-DAP-Seq(GSE60143)/Homer	TTWHGGTGCACC	1e-5	-1.211e+01	0.0000	104.0	22.22%	6823.4	14.53%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e-5	-1.208e+01	0.0000	26.0	5.56%	954.9	2.03%
Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer	RGCAATNAAA	1e-5	-1.208e+01	0.0000	182.0	38.89%	13764.8	29.31%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e-5	-1.186e+01	0.0000	26.0	5.56%	966.8	2.06%
bZIP48(bZIP)/colamp-bZIP48-DAP-Seq(GSE60143)/Homer	DDWWKVTSACGTGGC	1e-5	-1.175e+01	0.0000	52.0	11.11%	2734.4	5.82%
bZIP50(bZIP)/colamp-bZIP50-DAP-Seq(GSE60143)/Homer	GATGACGTCA	1e-5	-1.164e+01	0.0001	104.0	22.22%	6897.3	14.69%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e-4	-1.150e+01	0.0001	26.0	5.56%	987.2	2.10%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e-4	-1.140e+01	0.0001	104.0	22.22%	6937.0	14.77%
bZIP53(bZIP)/colamp-bZIP53-DAP-Seq(GSE60143)/Homer	NDNHSACGTGKMNNN	1e-4	-1.125e+01	0.0001	52.0	11.11%	2785.9	5.93%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e-4	-1.116e+01	0.0001	52.0	11.11%	2795.7	5.95%
bZIP68(bZIP)/col-bZIP68-DAP-Seq(GSE60143)/Homer	WGCCACGTGK	1e-4	-1.098e+01	0.0001	52.0	11.11%	2814.4	5.99%
WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer	MCTCCCMCRCAB	1e-4	-1.096e+01	0.0001	26.0	5.56%	1019.2	2.17%
RIN(MADS)/Tomato-RIN-ChIP-Seq(GSE116581)/Homer	CYAAAAWWGG	1e-4	-1.086e+01	0.0001	78.0	16.67%	4859.5	10.35%
TGA2(bZIP)/colamp-TGA2-DAP-Seq(GSE60143)/Homer	ACGTCAYCHH	1e-4	-1.080e+01	0.0001	78.0	16.67%	4868.4	10.37%
PIF7(bHLH)/col-PIF7-DAP-Seq(GSE60143)/Homer	CCACGTGGNH	1e-4	-1.079e+01	0.0001	26.0	5.56%	1029.8	2.19%
ATHB18(Homeobox)/colamp-ATHB18-DAP-Seq(GSE60143)/Homer	YCAATSATTG	1e-4	-1.067e+01	0.0001	26.0	5.56%	1037.5	2.21%
BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer	NAMCAGCTGK	1e-4	-1.062e+01	0.0001	52.0	11.11%	2852.9	6.08%
ATHB53(HB)/col-ATHB53-DAP-Seq(GSE60143)/Homer	CAATAATT	1e-4	-1.062e+01	0.0001	52.0	11.11%	2853.9	6.08%
ABI5(bZIP)/col-ABI5-DAP-Seq(GSE60143)/Homer	GCCACGTG	1e-4	-1.044e+01	0.0002	52.0	11.11%	2872.8	6.12%
ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer	TTAACCCTTTVNKKN	1e-4	-1.026e+01	0.0002	26.0	5.56%	1063.5	2.26%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e-4	-1.020e+01	0.0002	52.0	11.11%	2899.1	6.17%
E-box/Arabidopsis-Promoters/Homer	GCCACGTG	1e-4	-1.004e+01	0.0002	52.0	11.11%	2917.7	6.21%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e-4	-9.999e+00	0.0002	52.0	11.11%	2922.9	6.22%
PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer	RTGATTKATRGN	1e-4	-9.910e+00	0.0003	78.0	16.67%	4998.5	10.64%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e-4	-9.675e+00	0.0003	26.0	5.56%	1102.0	2.35%
HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer	TWVGGTCCGC	1e-4	-9.574e+00	0.0004	26.0	5.56%	1109.4	2.36%
Pho4(bHLH)/Yeast-Pho4-ChIP-Seq(GSE29506)/Homer	AAGCACGTGBGD	1e-4	-9.290e+00	0.0005	26.0	5.56%	1129.6	2.41%
SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer	GCAACAGGTG	1e-3	-9.193e+00	0.0005	26.0	5.56%	1136.7	2.42%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e-3	-9.159e+00	0.0006	78.0	16.67%	5116.0	10.89%
EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer	NRBCARRGGTCA	1e-3	-8.619e+00	0.0009	52.0	11.11%	3090.6	6.58%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e-3	-8.617e+00	0.0009	26.0	5.56%	1179.0	2.51%
ASL18(LOBAS2)/colamp-ASL18-DAP-Seq(GSE60143)/Homer	CCGGAAAWTCMGGAR	1e-3	-8.529e+00	0.0010	104.0	22.22%	7452.8	15.87%
Unknown6/Drosophila-Promoters/Homer	AATTTTAAAA	1e-3	-8.397e+00	0.0012	52.0	11.11%	3120.0	6.64%
ANAC094(NAC)/col-ANAC094-DAP-Seq(GSE60143)/Homer	DVCGTRNNNNNYACG	1e-3	-8.389e+00	0.0012	52.0	11.11%	3120.0	6.64%
At1g76110(ARID)/colamp-At1g76110-DAP-Seq(GSE60143)/Homer	ATTTAATG	1e-3	-8.367e+00	0.0012	52.0	11.11%	3123.8	6.65%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e-3	-8.361e+00	0.0012	26.0	5.56%	1200.0	2.56%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e-3	-8.294e+00	0.0013	78.0	16.67%	5259.4	11.20%
Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer	CYHATAAAAN	1e-3	-8.146e+00	0.0015	156.0	33.33%	12244.0	26.07%
GT3a(Trihelix)/col-GT3a-DAP-Seq(GSE60143)/Homer	WNACACGTGTYWWAW	1e-3	-8.113e+00	0.0015	26.0	5.56%	1219.6	2.60%
Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer	GGCMATGAAA	1e-3	-8.087e+00	0.0015	78.0	16.67%	5295.8	11.28%
AT5G47660(Trihelix)/colamp-AT5G47660-DAP-Seq(GSE60143)/Homer	AWTTTTACCG	1e-3	-7.985e+00	0.0017	104.0	22.22%	7563.4	16.11%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e-3	-7.967e+00	0.0017	26.0	5.56%	1231.4	2.62%
AT2G28810(C2C2dof)/colamp-AT2G28810-DAP-Seq(GSE60143)/Homer	VAAAAAGTWA	1e-3	-7.850e+00	0.0019	130.0	27.78%	9924.5	21.14%
LBD2(LOBAS2)/colamp-LBD2-DAP-Seq(GSE60143)/Homer	TCCGAWTTTTTCGGN	1e-3	-7.751e+00	0.0021	52.0	11.11%	3207.6	6.83%
HAT2(Homeobox)/colamp-HAT2-DAP-Seq(GSE60143)/Homer	CYAATSATTR	1e-3	-7.751e+00	0.0021	78.0	16.67%	5355.7	11.41%
GT2(Trihelix)/colamp-GT2-DAP-Seq(GSE60143)/Homer	AMGGTAAAWWWN	1e-3	-7.597e+00	0.0024	78.0	16.67%	5383.3	11.46%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e-3	-7.578e+00	0.0025	26.0	5.56%	1264.0	2.69%
TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer	SMCATCTGKH	1e-3	-7.574e+00	0.0025	52.0	11.11%	3232.8	6.88%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e-3	-7.554e+00	0.0025	78.0	16.67%	5391.8	11.48%
ATHB33(ZFHD)/col-ATHB33-DAP-Seq(GSE60143)/Homer	NGTRATTAAK	1e-3	-7.483e+00	0.0027	104.0	22.22%	7670.3	16.33%
GATA12(C2C2gata)/col-GATA12-DAP-Seq(GSE60143)/Homer	YAGATCTRAW	1e-3	-7.401e+00	0.0029	52.0	11.11%	3257.0	6.94%
SPL13(SBP)/col-SPL13-DAP-Seq(GSE60143)/Homer	WAHTGTACGGAH	1e-3	-7.373e+00	0.0029	26.0	5.56%	1282.4	2.73%
MYB58(MYB)/colamp-MYB58-DAP-Seq(GSE60143)/Homer	YYYACCWACC	1e-3	-7.355e+00	0.0030	78.0	16.67%	5428.8	11.56%
SHN3(AP2EREBP)/col-SHN3-DAP-Seq(GSE60143)/Homer	CCGCCGCC	1e-3	-7.329e+00	0.0030	26.0	5.56%	1286.6	2.74%
IDD5(C2H2)/colamp-IDD5-DAP-Seq(GSE60143)/Homer	TTTTGTCTTTTTBTK	1e-3	-7.272e+00	0.0032	52.0	11.11%	3276.8	6.98%
MYB41(MYB)/col-MYB41-DAP-Seq(GSE60143)/Homer	BYTYACCTAA	1e-3	-7.174e+00	0.0035	26.0	5.56%	1300.7	2.77%
Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer	BCCWTTGTBYKV	1e-3	-7.061e+00	0.0039	104.0	22.22%	7764.4	16.54%
FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer	TGTTTAYTTAGC	1e-3	-7.045e+00	0.0040	52.0	11.11%	3310.1	7.05%
TRP2(MYBrelated)/colamp-TRP2-DAP-Seq(GSE60143)/Homer	TAAACCCT	1e-3	-6.958e+00	0.0043	26.0	5.56%	1320.9	2.81%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e-3	-6.926e+00	0.0044	52.0	11.11%	3328.8	7.09%
Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer	CTTTGATGTGSB	1e-2	-6.831e+00	0.0048	26.0	5.56%	1332.2	2.84%
AT4G26030(C2H2)/col-AT4G26030-DAP-Seq(GSE60143)/Homer	BYYACCWACY	1e-2	-6.802e+00	0.0050	78.0	16.67%	5535.6	11.79%
ATHB21(HB)/colamp-ATHB21-DAP-Seq(GSE60143)/Homer	YCAATWAT	1e-2	-6.739e+00	0.0053	52.0	11.11%	3357.1	7.15%
bZIP3(bZIP)/col-bZIP3-DAP-Seq(GSE60143)/Homer	DWKNHSACGTGGCAD	1e-2	-6.733e+00	0.0053	52.0	11.11%	3358.0	7.15%
bZIP52(bZIP)/colamp-bZIP52-DAP-Seq(GSE60143)/Homer	NDNHCAGCTGTCANN	1e-2	-6.556e+00	0.0063	52.0	11.11%	3386.2	7.21%
MYB74(MYB)/colamp-MYB74-DAP-Seq(GSE60143)/Homer	YYYACCTACCWH	1e-2	-6.507e+00	0.0066	52.0	11.11%	3395.0	7.23%
MYB13(MYB)/col-MYB13-DAP-Seq(GSE60143)/Homer	HYCACCWACCHH	1e-2	-6.469e+00	0.0068	52.0	11.11%	3400.5	7.24%
TGA10(bZIP)/colamp-TGA10-DAP-Seq(GSE60143)/Homer	ATGACGTC	1e-2	-6.414e+00	0.0071	52.0	11.11%	3409.1	7.26%
MYB81(MYB)/col-MYB81-DAP-Seq(GSE60143)/Homer	NWAACSGWTWNN	1e-2	-6.408e+00	0.0071	156.0	33.33%	12714.5	27.08%
ARF2(ARF)/col-ARF2-DAP-Seq(GSE60143)/Homer	TTGTCGGMWN	1e-2	-6.390e+00	0.0072	130.0	27.78%	10293.6	21.92%
EBF2(EBF)/BrownAdipose-EBF2-ChIP-Seq(GSE97114)/Homer	NABTCCCWDGGGAVH	1e-2	-6.277e+00	0.0081	26.0	5.56%	1387.9	2.96%
AT3G12130(C3H)/colamp-AT3G12130-DAP-Seq(GSE60143)/Homer	TMACTTTTTV	1e-2	-6.107e+00	0.0095	130.0	27.78%	10371.0	22.09%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e-2	-6.086e+00	0.0097	26.0	5.56%	1407.7	3.00%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e-2	-6.042e+00	0.0101	52.0	11.11%	3471.6	7.39%
ATHB5(HB)/colamp-ATHB5-DAP-Seq(GSE60143)/Homer	AATGATTG	1e-2	-6.036e+00	0.0101	78.0	16.67%	5694.8	12.13%
AT3G52440(C2C2dof)/colamp-AT3G52440-DAP-Seq(GSE60143)/Homer	DTHACTTTTT	1e-2	-6.024e+00	0.0102	130.0	27.78%	10394.8	22.14%
DEL2(E2FDP)/col-DEL2-DAP-Seq(GSE60143)/Homer	WTTTCSCGCC	1e-2	-5.992e+00	0.0105	26.0	5.56%	1417.6	3.02%
CDM1(C3H)/colamp-CDM1-DAP-Seq(GSE60143)/Homer	CCGAWAWTWTCGGAN	1e-2	-5.936e+00	0.0110	26.0	5.56%	1424.0	3.03%
AT5G63260(C3H)/col-AT5G63260-DAP-Seq(GSE60143)/Homer	RAAAAAGTRA	1e-2	-5.936e+00	0.0110	130.0	27.78%	10419.6	22.19%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e-2	-5.914e+00	0.0112	52.0	11.11%	3493.1	7.44%
GAGA-repeat/Arabidopsis-Promoters/Homer	CTCTCTCTCY	1e-2	-5.816e+00	0.0123	52.0	11.11%	3510.4	7.48%
WIP5(C2H2)/colamp-WIP5-DAP-Seq(GSE60143)/Homer	TDTTCTCMAGGT	1e-2	-5.742e+00	0.0132	52.0	11.11%	3523.3	7.50%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e-2	-5.647e+00	0.0144	26.0	5.56%	1455.5	3.10%
SeqBias: CA-repeat	CACACACACA	1e-2	-5.510e+00	0.0165	234.0	50.00%	20567.6	43.80%
AT1G20910(ARID)/col-AT1G20910-DAP-Seq(GSE60143)/Homer	THAATTRAWN	1e-2	-5.503e+00	0.0165	130.0	27.78%	10545.7	22.46%
ATHB6(Homeobox)/col-ATHB6-DAP-Seq(GSE60143)/Homer	AATGATTG	1e-2	-5.404e+00	0.0182	104.0	22.22%	8175.2	17.41%
NAC2(NAC)/colamp-NAC2-DAP-Seq(GSE60143)/Homer	TDCTTGNNNNNCAAG	1e-2	-5.395e+00	0.0183	52.0	11.11%	3586.7	7.64%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e-2	-5.303e+00	0.0199	26.0	5.56%	1495.6	3.18%
TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer	CYRCATTCCA	1e-2	-5.262e+00	0.0207	52.0	11.11%	3611.0	7.69%
MYB40(MYB)/col-MYB40-DAP-Seq(GSE60143)/Homer	TGGTAGGTRARA	1e-2	-5.106e+00	0.0241	26.0	5.56%	1519.5	3.24%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e-2	-5.023e+00	0.0261	78.0	16.67%	5928.8	12.63%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e-2	-4.927e+00	0.0286	78.0	16.67%	5952.5	12.68%
AT5G05550(Trihelix)/col-AT5G05550-DAP-Seq(GSE60143)/Homer	HDNHDTCKCCGGMGA	1e-2	-4.871e+00	0.0301	156.0	33.33%	13203.3	28.12%
MYB107(MYB)/col-MYB107-DAP-Seq(GSE60143)/Homer	RGTWGGTRRR	1e-2	-4.865e+00	0.0302	104.0	22.22%	8327.8	17.74%
AT5G22990(C2H2)/col-AT5G22990-DAP-Seq(GSE60143)/Homer	WCGAHDTCGWHN	1e-2	-4.832e+00	0.0311	52.0	11.11%	3695.2	7.87%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e-2	-4.760e+00	0.0333	26.0	5.56%	1563.2	3.33%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e-2	-4.617e+00	0.0382	52.0	11.11%	3739.8	7.96%
Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer	TYTGACCASWRG	1e-2	-4.617e+00	0.0382	26.0	5.56%	1582.9	3.37%
bHLH157(bHLH)/col-bHLH157-DAP-Seq(GSE60143)/Homer	KACACGTCTCTY	1e-1	-4.485e+00	0.0433	26.0	5.56%	1600.3	3.41%
NLP7(RWPRK)/col-NLP7-DAP-Seq(GSE60143)/Homer	TGRCCYTTCR	1e-1	-4.430e+00	0.0456	78.0	16.67%	6081.9	12.95%
IBL1(bHLH)/Seedling-IBL1-ChIP-Seq(GSE51120)/Homer	CACGTGCC	1e-1	-4.389e+00	0.0473	78.0	16.67%	6093.0	12.98%
ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer	GGAACAGCCG	1e-1	-4.356e+00	0.0487	26.0	5.56%	1619.0	3.45%
PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer	TGGTACATTCCA	1e-1	-4.342e+00	0.0492	26.0	5.56%	1620.6	3.45%
dof43(C2C2dof)/colamp-dof43-DAP-Seq(GSE60143)/Homer	NAAAAAGTDA	1e-1	-4.341e+00	0.0492	78.0	16.67%	6105.4	13.00%
Pho2(bHLH)/Yeast-Pho2-ChIP-Seq(GSE29506)/Homer	CCCACGTGCT	1e-1	-4.258e+00	0.0531	26.0	5.56%	1632.9	3.48%
At3g04030(G2like)/col-At3g04030-DAP-Seq(GSE60143)/Homer	DRGAATCT	1e-1	-4.225e+00	0.0547	78.0	16.67%	6137.9	13.07%
ATHB13(Homeobox)/col-ATHB13-DAP-Seq(GSE60143)/Homer	CAATAATT	1e-1	-4.157e+00	0.0583	78.0	16.67%	6156.7	13.11%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e-1	-4.143e+00	0.0589	52.0	11.11%	3842.4	8.18%
ABF1(bZIP)/Arabidopsis-ABF1-ChIP-Seq(GSE80564)/Homer	CACGTGGC	1e-1	-4.139e+00	0.0590	52.0	11.11%	3843.5	8.19%
Tal1	CATCTG	1e-1	-4.077e+00	0.0625	52.0	11.11%	3857.8	8.22%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e-1	-4.062e+00	0.0632	78.0	16.67%	6183.3	13.17%
HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer	TGCCAGCB	1e-1	-3.991e+00	0.0676	52.0	11.11%	3877.4	8.26%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e-1	-3.969e+00	0.0688	52.0	11.11%	3882.3	8.27%
AT1G76880(Trihelix)/col-AT1G76880-DAP-Seq(GSE60143)/Homer	ACGGTAAAAW	1e-1	-3.968e+00	0.0688	26.0	5.56%	1675.6	3.57%
At1g78700(BZR)/col-At1g78700-DAP-Seq(GSE60143)/Homer	NNNNCACGTGNNNNN	1e-1	-3.897e+00	0.0735	26.0	5.56%	1686.3	3.59%
GAGA-repeat/SacCer-Promoters/Homer	CTYTCTYTCTCTCTC	1e-1	-3.893e+00	0.0735	182.0	38.89%	16088.2	34.26%
LMI1(HB)/colamp-LMI1-DAP-Seq(GSE60143)/Homer	AATTATTG	1e-1	-3.880e+00	0.0742	52.0	11.11%	3903.3	8.31%
At4g36780(BZR)/col-At4g36780-DAP-Seq(GSE60143)/Homer	NNNNNNCACGTGNNN	1e-1	-3.782e+00	0.0815	26.0	5.56%	1704.3	3.63%
Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer	MCAGCTGBYH	1e-1	-3.731e+00	0.0855	52.0	11.11%	3939.6	8.39%
LBD23(LOBAS2)/colamp-LBD23-DAP-Seq(GSE60143)/Homer	GCGNAWWWTNCGCYW	1e-1	-3.594e+00	0.0977	52.0	11.11%	3973.5	8.46%
CRF4(AP2EREBP)/colamp-CRF4-DAP-Seq(GSE60143)/Homer	CGCCGCCA	1e-1	-3.546e+00	0.1021	52.0	11.11%	3985.2	8.49%
Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer	HDGYAATGAAAN	1e-1	-3.541e+00	0.1023	104.0	22.22%	8757.0	18.65%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e-1	-3.515e+00	0.1047	52.0	11.11%	3993.2	8.50%
HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer	TGATKGATGR	1e-1	-3.380e+00	0.1193	26.0	5.56%	1771.4	3.77%
AT2G38300(G2like)/col-AT2G38300-DAP-Seq(GSE60143)/Homer	ADRGAATGTT	1e-1	-3.329e+00	0.1252	78.0	16.67%	6408.4	13.65%
KAN2(G2like)/colamp-KAN2-DAP-Seq(GSE60143)/Homer	ATATTCTY	1e-1	-3.326e+00	0.1252	78.0	16.67%	6409.1	13.65%
DREB26(AP2EREBP)/col-DREB26-DAP-Seq(GSE60143)/Homer	CCACCGACAH	1e-1	-3.284e+00	0.1300	26.0	5.56%	1788.2	3.81%
SeqBias: GCW-triplet	GCWGCWGCWGCW	1e-1	-3.270e+00	0.1313	468.0	100.00%	46630.2	99.30%
bHLH34(bHLH)/colamp-bHLH34-DAP-Seq(GSE60143)/Homer	HGWGRHWGACACGTG	1e-1	-3.239e+00	0.1350	26.0	5.56%	1796.3	3.83%
TGA6(bZIP)/colamp-TGA6-DAP-Seq(GSE60143)/Homer	TGACGTCABC	1e-1	-3.238e+00	0.1350	52.0	11.11%	4066.8	8.66%
MYB55(MYB)/colamp-MYB55-DAP-Seq(GSE60143)/Homer	YACCWAMC	1e-1	-3.188e+00	0.1411	78.0	16.67%	6455.4	13.75%
AT3G09735(S1Falike)/col-AT3G09735-DAP-Seq(GSE60143)/Homer	TTCTAGAANMTTCTA	1e-1	-3.179e+00	0.1420	26.0	5.56%	1807.1	3.85%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e-1	-3.152e+00	0.1454	26.0	5.56%	1812.3	3.86%
SPL14(SBP)/col-SPL14-DAP-Seq(GSE60143)/Homer	NNWHTGTACGGAHNH	1e-1	-3.109e+00	0.1512	26.0	5.56%	1820.3	3.88%
MYB62(MYB)/colamp-MYB62-DAP-Seq(GSE60143)/Homer	NTACCTAACT	1e-1	-3.075e+00	0.1560	78.0	16.67%	6494.1	13.83%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e-1	-3.069e+00	0.1563	78.0	16.67%	6496.3	13.83%
TGA4(bZIP)/colamp-TGA4-DAP-Seq(GSE60143)/Homer	RTGACGTCAKCW	1e-1	-3.066e+00	0.1563	26.0	5.56%	1828.3	3.89%
DLX2(Homeobox)/BasalGanglia-Dlx2-ChIP-seq(GSE124936)/Homer	NNNTAATTAS	1e-1	-3.050e+00	0.1583	104.0	22.22%	8943.7	19.05%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e-1	-3.042e+00	0.1590	104.0	22.22%	8946.5	19.05%
At3g45610(C2C2dof)/col-At3g45610-DAP-Seq(GSE60143)/Homer	TWACTTTTTS	1e-1	-2.810e+00	0.1998	78.0	16.67%	6589.7	14.03%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e-1	-2.781e+00	0.2051	52.0	11.11%	4197.4	8.94%
KANADI1(Myb)/Seedling-KAN1-ChIP-Seq(GSE48081)/Homer	ARGAATAWWN	1e-1	-2.741e+00	0.2128	78.0	16.67%	6615.2	14.09%
HY5(bZIP)/colamp-HY5-DAP-Seq(GSE60143)/Homer	RRTSACGTSD	1e-1	-2.738e+00	0.2128	78.0	16.67%	6616.4	14.09%
MYB10(MYB)/col-MYB10-DAP-Seq(GSE60143)/Homer	YCCACCTACCHH	1e-1	-2.728e+00	0.2141	26.0	5.56%	1895.6	4.04%
OBP4(C2C2dof)/col-OBP4-DAP-Seq(GSE60143)/Homer	WTTHACTTTTTB	1e-1	-2.699e+00	0.2198	78.0	16.67%	6631.4	14.12%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e-1	-2.633e+00	0.2339	26.0	5.56%	1915.9	4.08%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e-1	-2.596e+00	0.2419	26.0	5.56%	1923.2	4.10%
IDD4(C2H2)/col-IDD4-DAP-Seq(GSE60143)/Homer	TTTGTCTTTWTB	1e-1	-2.518e+00	0.2609	52.0	11.11%	4280.0	9.11%
BBX31(Orphan)/col-BBX31-DAP-Seq(GSE60143)/Homer	NAAAAAGTDA	1e-1	-2.470e+00	0.2728	78.0	16.67%	6721.8	14.31%
TGA9(bZIP)/colamp-TGA9-DAP-Seq(GSE60143)/Homer	VTGACGTC	1e-1	-2.462e+00	0.2739	78.0	16.67%	6724.1	14.32%
GRF9(GRF)/colamp-GRF9-DAP-Seq(GSE60143)/Homer	NWCTGACANNNNNNN	1e-1	-2.314e+00	0.3168	26.0	5.56%	1987.7	4.23%
MYB92(MYB)/colamp-MYB92-DAP-Seq(GSE60143)/Homer	GGTAGGTR	1e0	-2.242e+00	0.3394	52.0	11.11%	4374.6	9.32%
SEP3(MADS)/Arabidoposis-Flower-Sep3-ChIP-Seq/Homer	CCAAAAAGGG	1e0	-2.233e+00	0.3412	52.0	11.11%	4377.3	9.32%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-2.231e+00	0.3412	26.0	5.56%	2007.1	4.27%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e0	-2.158e+00	0.3655	26.0	5.56%	2025.7	4.31%
MS188(MYB)/colamp-MS188-DAP-Seq(GSE60143)/Homer	WARKTAGGTRRA	1e0	-2.083e+00	0.3928	52.0	11.11%	4432.7	9.44%
TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer	TRCATTCCAG	1e0	-2.041e+00	0.4084	52.0	11.11%	4448.1	9.47%
GATA11(C2C2gata)/col-GATA11-DAP-Seq(GSE60143)/Homer	DDHYYAGATCTR	1e0	-1.981e+00	0.4323	26.0	5.56%	2071.7	4.41%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-1.974e+00	0.4342	26.0	5.56%	2073.6	4.42%
ANAC103(NAC)/col-ANAC103-DAP-Seq(GSE60143)/Homer	AACTTGNWNWNCAAG	1e0	-1.893e+00	0.4690	26.0	5.56%	2095.8	4.46%
SOL1(CPP)/colamp-SOL1-DAP-Seq(GSE60143)/Homer	ATTTAAATHN	1e0	-1.877e+00	0.4750	78.0	16.67%	6985.2	14.88%
SeqBias: G/A bias	RRRRRRRRRR	1e0	-1.867e+00	0.4783	468.0	100.00%	46771.0	99.60%
ANAC075(NAC)/col-ANAC075-DAP-Seq(GSE60143)/Homer	CTTSWWNWWSAAGYT	1e0	-1.851e+00	0.4849	26.0	5.56%	2107.2	4.49%
GATA1(C2C2gata)/colamp-GATA1-DAP-Seq(GSE60143)/Homer	DDWWYYAGATCTRRW	1e0	-1.847e+00	0.4852	26.0	5.56%	2108.4	4.49%
AT3G25990(Trihelix)/colamp-AT3G25990-DAP-Seq(GSE60143)/Homer	TTAACCATAG	1e0	-1.781e+00	0.5167	52.0	11.11%	4552.3	9.69%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-1.768e+00	0.5221	26.0	5.56%	2131.9	4.54%
ANAC016(NAC)/col-ANAC016-DAP-Seq(GSE60143)/Homer	WNCTTGNNNNNCAMG	1e0	-1.718e+00	0.5471	52.0	11.11%	4579.4	9.75%
AT1G49560(G2like)/colamp-AT1G49560-DAP-Seq(GSE60143)/Homer	GAWTCTNWDA	1e0	-1.664e+00	0.5755	104.0	22.22%	9616.7	20.48%
ERF9(AP2EREBP)/colamp-ERF9-DAP-Seq(GSE60143)/Homer	AWATGGCGGCGG	1e0	-1.658e+00	0.5772	26.0	5.56%	2164.0	4.61%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-1.591e+00	0.6152	26.0	5.56%	2185.2	4.65%
Adof1(C2C2dof)/col-Adof1-DAP-Seq(GSE60143)/Homer	NRWAAAGYDV	1e0	-1.589e+00	0.6152	130.0	27.78%	12209.3	26.00%
ANAC042(NAC)/col-ANAC042-DAP-Seq(GSE60143)/Homer	CGTNDHNDHNACGKY	1e0	-1.551e+00	0.6368	52.0	11.11%	4654.5	9.91%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e0	-1.542e+00	0.6406	26.0	5.56%	2201.4	4.69%
SeqBias: C/A-bias	MMMMMMMMMM	1e0	-1.537e+00	0.6416	468.0	100.00%	46803.5	99.67%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-1.496e+00	0.6669	52.0	11.11%	4680.6	9.97%
TGA1(bZIP)/colamp-TGA1-DAP-Seq(GSE60143)/Homer	TGACGTCAKC	1e0	-1.491e+00	0.6682	26.0	5.56%	2218.2	4.72%
ATHB25(ZFHD)/colamp-ATHB25-DAP-Seq(GSE60143)/Homer	TAATTAVB	1e0	-1.472e+00	0.6789	78.0	16.67%	7202.7	15.34%
ERF3(AP2EREBP)/colamp-ERF3-DAP-Seq(GSE60143)/Homer	ATGGCGGCGG	1e0	-1.446e+00	0.6945	52.0	11.11%	4704.5	10.02%
RRTF1(AP2EREBP)/colamp-RRTF1-DAP-Seq(GSE60143)/Homer	CCGCCGCHATTT	1e0	-1.393e+00	0.7308	26.0	5.56%	2252.4	4.80%
HLH-1(bHLH)/cElegans-Embryo-HLH1-ChIP-Seq(modEncode)/Homer	RACAGCTGTTBH	1e0	-1.365e+00	0.7492	26.0	5.56%	2262.8	4.82%
At3g12730(G2like)/colamp-At3g12730-DAP-Seq(GSE60143)/Homer	AAGATTCT	1e0	-1.358e+00	0.7523	104.0	22.22%	9815.1	20.90%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-1.344e+00	0.7609	104.0	22.22%	9825.6	20.92%
ATHB40(HB)/col-ATHB40-DAP-Seq(GSE60143)/Homer	HCAATWATTG	1e0	-1.330e+00	0.7691	52.0	11.11%	4763.5	10.14%
ATHB24(ZFHD)/colamp-ATHB24-DAP-Seq(GSE60143)/Homer	TAATTAAS	1e0	-1.320e+00	0.7742	52.0	11.11%	4769.0	10.16%
CCA(Myb)/Arabidopsis-CCA.GFP-ChIP-Seq(GSE70533)/Homer	AGATATYTTT	1e0	-1.296e+00	0.7912	52.0	11.11%	4781.2	10.18%
DLX5(Homeobox)/BasalGanglia-Dlx5-ChIP-seq(GSE124936)/Homer	SSTAATTA	1e0	-1.270e+00	0.8098	52.0	11.11%	4795.4	10.21%
At1g74840(MYBrelated)/col100-At1g74840-DAP-Seq(GSE60143)/Homer	YHTTATCCAWWT	1e0	-1.260e+00	0.8149	52.0	11.11%	4800.4	10.22%
EGL-5(Homeobox)/cElegans-L3-EGL5-ChIP-Seq(modEncode)/Homer	ATTTAATGGG	1e0	-1.237e+00	0.8316	78.0	16.67%	7348.4	15.65%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e0	-1.197e+00	0.8631	52.0	11.11%	4835.7	10.30%
At1g19210(AP2EREBP)/colamp-At1g19210-DAP-Seq(GSE60143)/Homer	HCACCGACCAHN	1e0	-1.173e+00	0.8822	104.0	22.22%	9951.4	21.19%
At3g24120(G2like)/col-At3g24120-DAP-Seq(GSE60143)/Homer	NWWAGMATMW	1e0	-1.143e+00	0.9065	182.0	38.89%	17720.0	37.74%
TCX2(CPP)/colamp-TCX2-DAP-Seq(GSE60143)/Homer	NNWWTTYRAAHN	1e0	-1.112e+00	0.9317	78.0	16.67%	7434.8	15.83%
ERF104(AP2EREBP)/col-ERF104-DAP-Seq(GSE60143)/Homer	GGCGGCGG	1e0	-1.111e+00	0.9317	52.0	11.11%	4885.6	10.40%
ATHB7(Homeobox)/col-ATHB7-DAP-Seq(GSE60143)/Homer	AATGATTG	1e0	-1.106e+00	0.9322	52.0	11.11%	4888.6	10.41%
MYB3(MYB)/Arabidopsis-MYB3-ChIP-Seq(GSE80564)/Homer	GKTAGGTRGG	1e0	-1.087e+00	0.9472	78.0	16.67%	7452.5	15.87%
MYB98(MYB)/col-MYB98-DAP-Seq(GSE60143)/Homer	NWDCCGTTAC	1e0	-1.070e+00	0.9613	26.0	5.56%	2380.0	5.07%
ATHB34(ZFHD)/colamp-ATHB34-DAP-Seq(GSE60143)/Homer	TRATTARS	1e0	-1.042e+00	0.9852	52.0	11.11%	4927.8	10.49%
SPL5(SBP)/colamp-SPL5-DAP-Seq(GSE60143)/Homer	NNHGTACGGHNN	1e0	-1.036e+00	0.9888	52.0	11.11%	4931.1	10.50%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e0	-1.018e+00	1.0000	26.0	5.56%	2402.4	5.12%
PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer	KTGTTTGC	1e0	-1.014e+00	1.0000	130.0	27.78%	12662.9	26.97%
ANAC047(NAC)/colamp-ANAC047-DAP-Seq(GSE60143)/Homer	WACACGTAACTT	1e0	-9.954e-01	1.0000	52.0	11.11%	4957.4	10.56%
PHV(HB)/col-PHV-DAP-Seq(GSE60143)/Homer	RTAATSATTA	1e0	-9.625e-01	1.0000	26.0	5.56%	2428.6	5.17%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e0	-9.438e-01	1.0000	26.0	5.56%	2437.6	5.19%
MYB88(MYB)/col-MYB88-DAP-Seq(GSE60143)/Homer	HNACGCTCCT	1e0	-9.351e-01	1.0000	52.0	11.11%	4998.0	10.64%
REF6(Zf)/Arabidopsis-REF6-ChIP-Seq(GSE106942)/Homer	TVCTCTGTTT	1e0	-8.952e-01	1.0000	26.0	5.56%	2461.7	5.24%
ERF8(AP2EREBP)/colamp-ERF8-DAP-Seq(GSE60143)/Homer	CGCCGYCATW	1e0	-8.713e-01	1.0000	78.0	16.67%	7622.8	16.23%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-8.543e-01	1.0000	26.0	5.56%	2482.9	5.29%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-8.316e-01	1.0000	26.0	5.56%	2494.8	5.31%
ERF4(AP2EREBP)/colamp-ERF4-DAP-Seq(GSE60143)/Homer	WDWTGGCGGCGG	1e0	-8.220e-01	1.0000	78.0	16.67%	7665.9	16.33%
AT5G45580(G2like)/colamp-AT5G45580-DAP-Seq(GSE60143)/Homer	ADRGAATCTH	1e0	-8.155e-01	1.0000	104.0	22.22%	10264.9	21.86%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-8.133e-01	1.0000	130.0	27.78%	12863.3	27.39%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-7.931e-01	1.0000	26.0	5.56%	2515.2	5.36%
ANAC079(NAC)/colamp-ANAC079-DAP-Seq(GSE60143)/Homer	TACACGCAACCT	1e0	-7.913e-01	1.0000	26.0	5.56%	2516.5	5.36%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-7.542e-01	1.0000	52.0	11.11%	5130.0	10.92%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e0	-7.388e-01	1.0000	26.0	5.56%	2546.3	5.42%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e0	-7.003e-01	1.0000	78.0	16.67%	7780.5	16.57%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e0	-6.923e-01	1.0000	104.0	22.22%	10395.2	22.14%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-6.638e-01	1.0000	26.0	5.56%	2592.9	5.52%
LHX9(Homeobox)/Hct116-LHX9.V5-ChIP-Seq(GSE116822)/Homer	NGCTAATTAG	1e0	-6.565e-01	1.0000	78.0	16.67%	7825.2	16.66%
SeqBias: polyA-repeat	AAAAAAAAAA	1e0	-6.483e-01	1.0000	468.0	100.00%	46892.3	99.86%
MYB30(MYB)/colamp-MYB30-DAP-Seq(GSE60143)/Homer	AGGTAGTTGG	1e0	-6.400e-01	1.0000	52.0	11.11%	5227.0	11.13%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-6.286e-01	1.0000	26.0	5.56%	2615.8	5.57%
bHLH130(bHLH)/col-bHLH130-DAP-Seq(GSE60143)/Homer	GCAACTTG	1e0	-6.256e-01	1.0000	26.0	5.56%	2617.3	5.57%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-6.153e-01	1.0000	26.0	5.56%	2625.0	5.59%
SVP(MADS)/col-SVP-DAP-Seq(GSE60143)/Homer	ANTTWCCHAATTTGG	1e0	-6.094e-01	1.0000	26.0	5.56%	2628.3	5.60%
AT1G44830(AP2EREBP)/col-AT1G44830-DAP-Seq(GSE60143)/Homer	NCCACCGACA	1e0	-5.978e-01	1.0000	26.0	5.56%	2636.1	5.61%
RAP212(AP2EREBP)/col-RAP212-DAP-Seq(GSE60143)/Homer	CGCCGCCATTTT	1e0	-5.512e-01	1.0000	52.0	11.11%	5312.3	11.31%
At2g33710(AP2EREBP)/colamp-At2g33710-DAP-Seq(GSE60143)/Homer	WTKGCGGCKR	1e0	-5.474e-01	1.0000	104.0	22.22%	10573.4	22.52%
ERF73(AP2EREBP)/col-ERF73-DAP-Seq(GSE60143)/Homer	CCGCCGCC	1e0	-5.164e-01	1.0000	26.0	5.56%	2696.5	5.74%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-4.976e-01	1.0000	26.0	5.56%	2711.3	5.77%
FUS3(ABI3VP1)/col-FUS3-DAP-Seq(GSE60143)/Homer	DNNWTNTGCATGKNN	1e0	-4.926e-01	1.0000	26.0	5.56%	2715.3	5.78%
DLX1(Homeobox)/BasalGanglia-Dlx1-ChIP-seq(GSE124936)/Homer	NSNNTAATTA	1e0	-4.756e-01	1.0000	78.0	16.67%	8039.0	17.12%
GTL1(Trihelix)/colamp-GTL1-DAP-Seq(GSE60143)/Homer	WWTTTACCKY	1e0	-4.730e-01	1.0000	52.0	11.11%	5396.8	11.49%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-4.476e-01	1.0000	26.0	5.56%	2753.1	5.86%
MYB67(MYB)/col-MYB67-DAP-Seq(GSE60143)/Homer	YYYACCTAAC	1e0	-4.465e-01	1.0000	52.0	11.11%	5427.7	11.56%
LBD13(LOBAS2)/colamp-LBD13-DAP-Seq(GSE60143)/Homer	KCCGTNWTTTBCGGC	1e0	-4.448e-01	1.0000	52.0	11.11%	5430.0	11.56%
Initiator/Drosophila-Promoters/Homer	NTCAGTYG	1e0	-4.380e-01	1.0000	78.0	16.67%	8091.5	17.23%
CAMTA1(CAMTA)/col-CAMTA1-DAP-Seq(GSE60143)/Homer	WWAACGCGTT	1e0	-4.364e-01	1.0000	26.0	5.56%	2763.7	5.89%
ATY13(MYB)/col-ATY13-DAP-Seq(GSE60143)/Homer	YYYAACYRHH	1e0	-4.249e-01	1.0000	182.0	38.89%	18634.2	39.68%
GATA15(C2C2gata)/col-GATA15-DAP-Seq(GSE60143)/Homer	KATGATCA	1e0	-4.159e-01	1.0000	104.0	22.22%	10768.2	22.93%
SPCH(bHLH)/Seedling-SPCH-ChIP-Seq(GSE57497)/Homer	WNBCACGTGA	1e0	-3.701e-01	1.0000	52.0	11.11%	5525.8	11.77%
ATHB23(ZFHD)/col-ATHB23-DAP-Seq(GSE60143)/Homer	HTAATTARNN	1e0	-3.537e-01	1.0000	52.0	11.11%	5548.2	11.82%
AT1G77200(AP2EREBP)/colamp-AT1G77200-DAP-Seq(GSE60143)/Homer	ACCGACAHWD	1e0	-3.319e-01	1.0000	52.0	11.11%	5580.1	11.88%
ATAF1(NAC)/col-ATAF1-DAP-Seq(GSE60143)/Homer	YACGTMAY	1e0	-3.308e-01	1.0000	156.0	33.33%	16202.6	34.51%
RAP26(AP2EREBP)/colamp-RAP26-DAP-Seq(GSE60143)/Homer	HDATGGCGGCGG	1e0	-2.945e-01	1.0000	78.0	16.67%	8328.4	17.74%
Unknown2/Drosophila-Promoters/Homer	CATCMCTA	1e0	-2.899e-01	1.0000	26.0	5.56%	2917.9	6.21%
ERF7(AP2EREBP)/col-ERF7-DAP-Seq(GSE60143)/Homer	ATGRCGGCGG	1e0	-2.884e-01	1.0000	78.0	16.67%	8340.1	17.76%
MYB118(MYB)/colamp-MYB118-DAP-Seq(GSE60143)/Homer	TAWCCGTTAC	1e0	-2.868e-01	1.0000	26.0	5.56%	2921.1	6.22%
SeqBias: polyC-repeat	CCCCCCCCCC	1e0	-2.855e-01	1.0000	442.0	94.44%	44611.3	95.00%
bHLH122(bHLH)/col100-bHLH122-DAP-Seq(GSE60143)/Homer	NDDCAASTTGHHNWW	1e0	-2.645e-01	1.0000	26.0	5.56%	2950.1	6.28%
AT2G33550(Trihelix)/colamp-AT2G33550-DAP-Seq(GSE60143)/Homer	TTTAAGGGCAYTTTT	1e0	-2.486e-01	1.0000	78.0	16.67%	8423.9	17.94%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e0	-2.438e-01	1.0000	208.0	44.44%	21669.7	46.15%
OBP3(C2C2dof)/col-OBP3-DAP-Seq(GSE60143)/Homer	NYWACTTTTT	1e0	-2.239e-01	1.0000	130.0	27.78%	13826.5	29.44%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e0	-2.229e-01	1.0000	52.0	11.11%	5771.5	12.29%
TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer	AGATAAGANN	1e0	-1.983e-01	1.0000	104.0	22.22%	11234.2	23.92%
At2g01060(G2like)/colamp-At2g01060-DAP-Seq(GSE60143)/Homer	AGATKCBNWW	1e0	-1.905e-01	1.0000	182.0	38.89%	19215.7	40.92%
bHLH28(bHLH)/col-bHLH28-DAP-Seq(GSE60143)/Homer	NHHTGTACGGAH	1e0	-1.877e-01	1.0000	26.0	5.56%	3069.4	6.54%
At5g58900(MYBrelated)/colamp-At5g58900-DAP-Seq(GSE60143)/Homer	WWWTYTTATCTWWWW	1e0	-1.779e-01	1.0000	78.0	16.67%	8601.3	18.32%
AT1G28160(AP2EREBP)/colamp-AT1G28160-DAP-Seq(GSE60143)/Homer	GGCGGCGG	1e0	-1.775e-01	1.0000	78.0	16.67%	8602.0	18.32%
MYB70(MYB)/col-MYB70-DAP-Seq(GSE60143)/Homer	WTAACNGTTA	1e0	-1.739e-01	1.0000	104.0	22.22%	11309.1	24.08%
COG1(C2C2dof)/col-COG1-DAP-Seq(GSE60143)/Homer	DAAAAAGTGA	1e0	-1.718e-01	1.0000	52.0	11.11%	5888.8	12.54%
ERF11(AP2EREBP)/col-ERF11-DAP-Seq(GSE60143)/Homer	RTGGCGGCGG	1e0	-1.619e-01	1.0000	52.0	11.11%	5914.1	12.59%
AT5G66940(C2C2dof)/col-AT5G66940-DAP-Seq(GSE60143)/Homer	NNHACTTTWT	1e0	-1.619e-01	1.0000	78.0	16.67%	8649.1	18.42%
AT1G47655(C2C2dof)/colamp-AT1G47655-DAP-Seq(GSE60143)/Homer	YHACTTTTTS	1e0	-1.489e-01	1.0000	156.0	33.33%	16733.0	35.63%
At5g18450(AP2EREBP)/col-At5g18450-DAP-Seq(GSE60143)/Homer	CACCGCTT	1e0	-1.488e-01	1.0000	78.0	16.67%	8691.9	18.51%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-1.451e-01	1.0000	26.0	5.56%	3154.9	6.72%
LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer	CCTTTGATST	1e0	-1.398e-01	1.0000	26.0	5.56%	3166.8	6.74%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e0	-1.316e-01	1.0000	104.0	22.22%	11462.5	24.41%
ERF105(AP2EREBP)/colamp-ERF105-DAP-Seq(GSE60143)/Homer	TGGCGGCT	1e0	-1.311e-01	1.0000	52.0	11.11%	6004.6	12.79%
dof45(C2C2dof)/col-dof45-DAP-Seq(GSE60143)/Homer	NVAWAAAGTN	1e0	-1.250e-01	1.0000	104.0	22.22%	11489.3	24.47%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-1.173e-01	1.0000	208.0	44.44%	22144.8	47.16%
bHLH80(bHLH)/col-bHLH80-DAP-Seq(GSE60143)/Homer	NNNNDCAASTTGHNN	1e0	-1.040e-01	1.0000	26.0	5.56%	3259.8	6.94%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-1.006e-01	1.0000	26.0	5.56%	3269.5	6.96%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-9.116e-02	1.0000	26.0	5.56%	3299.8	7.03%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-8.586e-02	1.0000	26.0	5.56%	3317.2	7.06%
RVE1(MYBrelated)/col-RVE1-DAP-Seq(GSE60143)/Homer	AAATATCT	1e0	-7.631e-02	1.0000	26.0	5.56%	3352.6	7.14%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-7.466e-02	1.0000	78.0	16.67%	9013.2	19.19%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-7.449e-02	1.0000	78.0	16.67%	9014.3	19.20%
MYB105(MYB)/colamp-MYB105-DAP-Seq(GSE60143)/Homer	RATWCCGTTA	1e0	-7.205e-02	1.0000	52.0	11.11%	6242.6	13.29%
ASHR1(ND)/col-ASHR1-DAP-Seq(GSE60143)/Homer	NTGGTGAN	1e0	-6.636e-02	1.0000	52.0	11.11%	6273.5	13.36%
At1g64620(C2C2dof)/colamp-At1g64620-DAP-Seq(GSE60143)/Homer	CACTTTTT	1e0	-6.444e-02	1.0000	52.0	11.11%	6284.2	13.38%
Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer	AGGTGTGAAA	1e0	-6.383e-02	1.0000	26.0	5.56%	3404.6	7.25%
At1g75490(AP2EREBP)/colamp-At1g75490-DAP-Seq(GSE60143)/Homer	CACCGMCT	1e0	-6.142e-02	1.0000	130.0	27.78%	14549.0	30.98%
MYB49(MYB)/col-MYB49-DAP-Seq(GSE60143)/Homer	ARKTAGGTRR	1e0	-6.122e-02	1.0000	52.0	11.11%	6303.1	13.42%
AT3G58630(Trihelix)/col-AT3G58630-DAP-Seq(GSE60143)/Homer	TCTCCGGCGA	1e0	-5.994e-02	1.0000	26.0	5.56%	3422.7	7.29%
AtGRF6(GRF)/col-AtGRF6-DAP-Seq(GSE60143)/Homer	NTGTCAGADNNNNNN	1e0	-5.787e-02	1.0000	26.0	5.56%	3432.5	7.31%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-5.450e-02	1.0000	78.0	16.67%	9148.7	19.48%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-5.166e-02	1.0000	26.0	5.56%	3464.9	7.38%
Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer	DAGGTGTBAA	1e0	-5.166e-02	1.0000	26.0	5.56%	3464.2	7.38%
bcd(Homeobox)/Embryo-Bcd-ChIP-Seq(GSE86966)/Homer	VNNGGATTADNN	1e0	-5.054e-02	1.0000	52.0	11.11%	6373.6	13.57%
AT3G10030(Trihelix)/colamp-AT3G10030-DAP-Seq(GSE60143)/Homer	GCCGTTAA	1e0	-4.888e-02	1.0000	52.0	11.11%	6385.7	13.60%
Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer	VGCCATAAAA	1e0	-4.734e-02	1.0000	104.0	22.22%	11960.6	25.47%
RBFox2(?)/Heart-RBFox2-CLIP-Seq(GSE57926)/Homer	TGCATGCA	1e0	-4.056e-02	1.0000	52.0	11.11%	6452.0	13.74%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e0	-4.052e-02	1.0000	26.0	5.56%	3531.4	7.52%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-3.573e-02	1.0000	26.0	5.56%	3565.2	7.59%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e0	-3.533e-02	1.0000	26.0	5.56%	3568.8	7.60%
GATA14(C2C2gata)/col-GATA14-DAP-Seq(GSE60143)/Homer	AYCAGATCTG	1e0	-3.390e-02	1.0000	26.0	5.56%	3579.1	7.62%
MYB119(MYB)/colamp-MYB119-DAP-Seq(GSE60143)/Homer	YRACCGTTACDD	1e0	-3.352e-02	1.0000	26.0	5.56%	3582.2	7.63%
RAV1(RAV)/colamp-RAV1-DAP-Seq(GSE60143)/Homer	TWWTTTCTGTTG	1e0	-3.265e-02	1.0000	26.0	5.56%	3589.4	7.64%
CES-1(Homeobox)/cElegans-L1-CES1-ChIP-Seq(modEncode)/Homer	AAATTSAATTTN	1e0	-3.180e-02	1.0000	26.0	5.56%	3596.9	7.66%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e0	-3.144e-02	1.0000	26.0	5.56%	3599.7	7.67%
BIM2(bHLH)/col-BIM2-DAP-Seq(GSE60143)/Homer	NNNNCACGTGNN	1e0	-2.959e-02	1.0000	26.0	5.56%	3615.9	7.70%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-2.805e-02	1.0000	26.0	5.56%	3629.3	7.73%
AT3G57600(AP2EREBP)/col-AT3G57600-DAP-Seq(GSE60143)/Homer	GGCGGTGG	1e0	-2.689e-02	1.0000	26.0	5.56%	3641.0	7.75%
At4g31060(AP2EREBP)/colamp-At4g31060-DAP-Seq(GSE60143)/Homer	CACCGACAAW	1e0	-2.266e-02	1.0000	26.0	5.56%	3684.5	7.85%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-2.222e-02	1.0000	26.0	5.56%	3689.5	7.86%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e0	-2.136e-02	1.0000	26.0	5.56%	3699.0	7.88%
PIF5ox(bHLH)/Arabidopsis-PIF5ox-ChIP-Seq(GSE35062)/Homer	BCACGTGVDN	1e0	-1.958e-02	1.0000	26.0	5.56%	3721.1	7.92%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e0	-1.941e-02	1.0000	52.0	11.11%	6697.7	14.26%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e0	-1.904e-02	1.0000	26.0	5.56%	3728.8	7.94%
ANAC028(NAC)/col-ANAC028-DAP-Seq(GSE60143)/Homer	WRCTTGNNNNNCAAG	1e0	-1.758e-02	1.0000	26.0	5.56%	3748.3	7.98%
ANAC045(NAC)/col-ANAC045-DAP-Seq(GSE60143)/Homer	DNCKTVNNNNNNAMG	1e0	-1.511e-02	1.0000	78.0	16.67%	9640.1	20.53%
ATY19(MYB)/col-ATY19-DAP-Seq(GSE60143)/Homer	YYCACCWACCAT	1e0	-1.459e-02	1.0000	26.0	5.56%	3795.0	8.08%
RKD2(RWPRK)/colamp-RKD2-DAP-Seq(GSE60143)/Homer	GACKTTTCRDCTTCC	1e0	-1.366e-02	1.0000	26.0	5.56%	3810.9	8.12%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-1.247e-02	1.0000	26.0	5.56%	3832.9	8.16%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-1.190e-02	1.0000	52.0	11.11%	6849.7	14.59%
HuR(?)/HEK293-HuR-CLIP-Seq(GSE87887)/Homer	BTTTGGTTTG	1e0	-1.132e-02	1.0000	182.0	38.89%	20659.4	44.00%
NGA4(ABI3VP1)/col-NGA4-DAP-Seq(GSE60143)/Homer	TKNTCAGGTG	1e0	-1.118e-02	1.0000	52.0	11.11%	6868.2	14.63%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e0	-1.060e-02	1.0000	26.0	5.56%	3871.5	8.24%
MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer	DGCACACGTG	1e0	-1.020e-02	1.0000	26.0	5.56%	3880.0	8.26%
MYB77(MYB)/col-MYB77-DAP-Seq(GSE60143)/Homer	NYAACBGYMC	1e0	-1.014e-02	1.0000	78.0	16.67%	9778.3	20.82%
 Ik-1	NHTTGGGAATRCC	1e0	-9.967e-03	1.0000	468.0	100.00%	46957.1	100.00%
JGL(C2H2)/col-JGL-DAP-Seq(GSE60143)/Homer	ACYTTCAGTT	1e0	-9.516e-03	1.0000	52.0	11.11%	6916.5	14.73%
NFIL3(bZIP)/HepG2-NFIL3-ChIP-Seq(Encode)/Homer	VTTACGTAAYNNNNN	1e0	-8.753e-03	1.0000	26.0	5.56%	3916.6	8.34%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-8.350e-03	1.0000	26.0	5.56%	3927.5	8.36%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e0	-7.693e-03	1.0000	26.0	5.56%	3946.8	8.41%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e0	-7.367e-03	1.0000	26.0	5.56%	3956.4	8.43%
NAP(NAC)/col-NAP-DAP-Seq(GSE60143)/Homer	ARGTTACGTRTN	1e0	-6.230e-03	1.0000	52.0	11.11%	7039.7	14.99%
PUCHI(AP2EREBP)/colamp-PUCHI-DAP-Seq(GSE60143)/Homer	GCGCCGTY	1e0	-6.185e-03	1.0000	26.0	5.56%	3996.8	8.51%
AT1G71450(AP2EREBP)/col-AT1G71450-DAP-Seq(GSE60143)/Homer	DHDWTGTCGGTG	1e0	-6.164e-03	1.0000	104.0	22.22%	12759.2	27.17%
Dlx3(Homeobox)/Kerainocytes-Dlx3-ChIP-Seq(GSE89884)/Homer	NDGTAATTAC	1e0	-5.712e-03	1.0000	26.0	5.56%	4014.8	8.55%
ABR1(AP2EREBP)/colamp-ABR1-DAP-Seq(GSE60143)/Homer	AAATGGCGGCGG	1e0	-4.877e-03	1.0000	52.0	11.11%	7108.0	15.14%
ANAC057(NAC)/colamp-ANAC057-DAP-Seq(GSE60143)/Homer	DVCKTGNNNNNCAMG	1e0	-3.641e-03	1.0000	26.0	5.56%	4114.3	8.76%
VND4(NAC)/colamp-VND4-DAP-Seq(GSE60143)/Homer	WRCTTGWANWWCAAG	1e0	-3.575e-03	1.0000	26.0	5.56%	4118.8	8.77%
CDF3(C2C2dof)/colamp-CDF3-DAP-Seq(GSE60143)/Homer	AAAAGTRM	1e0	-2.855e-03	1.0000	52.0	11.11%	7254.1	15.45%
caudal(Homeobox)/Drosophila-Embryos-ChIP-Chip(modEncode)/Homer	GGYCATAAAW	1e0	-2.759e-03	1.0000	26.0	5.56%	4174.6	8.89%
MYB51(MYB)/col-MYB51-DAP-Seq(GSE60143)/Homer	GGTAGGTG	1e0	-2.621e-03	1.0000	26.0	5.56%	4185.6	8.91%
AT2G20110(CPP)/colamp-AT2G20110-DAP-Seq(GSE60143)/Homer	ATTYAAATHY	1e0	-2.391e-03	1.0000	52.0	11.11%	7301.8	15.55%
AT5G25475(ABI3VP1)/col-AT5G25475-DAP-Seq(GSE60143)/Homer	RNNRNCAAGCADNDB	1e0	-1.382e-03	1.0000	26.0	5.56%	4320.0	9.20%
MYB83(MYB)/colamp-MYB83-DAP-Seq(GSE60143)/Homer	CACCAACCWH	1e0	-1.368e-03	1.0000	78.0	16.67%	10396.3	22.14%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-1.244e-03	1.0000	78.0	16.67%	10423.5	22.20%
CEJ1(AP2EREBP)/col-CEJ1-DAP-Seq(GSE60143)/Homer	WWTGTCGGTG	1e0	-9.510e-04	1.0000	52.0	11.11%	7536.1	16.05%
PIF4(bHLH)/Seedling-PIF4-ChIP-Seq(GSE35315)/Homer	NNBCACGTGN	1e0	-8.910e-04	1.0000	26.0	5.56%	4408.8	9.39%
MYB96(MYB)/colamp-MYB96-DAP-Seq(GSE60143)/Homer	WGGTRGTTGG	1e0	-8.310e-04	1.0000	26.0	5.56%	4422.6	9.42%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-7.780e-04	1.0000	26.0	5.56%	4435.3	9.45%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e0	-7.250e-04	1.0000	26.0	5.56%	4449.7	9.48%
MYB3R1(MYB)/col-MYB3R1-DAP-Seq(GSE60143)/Homer	WWDTDACCGTTR	1e0	-5.210e-04	1.0000	26.0	5.56%	4514.1	9.61%
DAG2(C2C2dof)/col-DAG2-DAP-Seq(GSE60143)/Homer	WWTTHACTTTTT	1e0	-4.650e-04	1.0000	52.0	11.11%	7709.8	16.42%
Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer	NCYAATAAAA	1e0	-4.160e-04	1.0000	52.0	11.11%	7735.9	16.47%
SPL1(SBP)/colamp-SPL1-DAP-Seq(GSE60143)/Homer	HYGTACDTWH	1e0	-3.690e-04	1.0000	78.0	16.67%	10752.7	22.90%
En1(Homeobox)/SUM149-EN1-ChIP-Seq(GSE120957)/Homer	NDCTAATTAS	1e0	-3.470e-04	1.0000	78.0	16.67%	10768.9	22.93%
FEA4(bZIP)/Corn-FEA4-ChIP-Seq(GSE61954)/Homer	TGACGTCACS	1e0	-2.450e-04	1.0000	26.0	5.56%	4658.4	9.92%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e0	-2.430e-04	1.0000	26.0	5.56%	4660.8	9.93%
MYB101(MYB)/colamp-MYB101-DAP-Seq(GSE60143)/Homer	TAACNRMY	1e0	-2.270e-04	1.0000	104.0	22.22%	13762.6	29.31%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-2.180e-04	1.0000	26.0	5.56%	4680.1	9.97%
ESE3(AP2EREBP)/col-ESE3-DAP-Seq(GSE60143)/Homer	GACGGTGG	1e0	-1.870e-04	1.0000	52.0	11.11%	7919.9	16.87%
bHLHE41(bHLH)/proB-Bhlhe41-ChIP-Seq(GSE93764)/Homer	KCACGTGMCN	1e0	-1.610e-04	1.0000	26.0	5.56%	4736.4	10.09%
TAGL1(MADS)/Tomato-TAGL1-ChIP-Seq(GSE116581)/Homer	CCAAAAATRG	1e0	-1.480e-04	1.0000	26.0	5.56%	4752.7	10.12%
AT2G15740(C2H2)/col-AT2G15740-DAP-Seq(GSE60143)/Homer	DHNDWATCGATD	1e0	-1.370e-04	1.0000	104.0	22.22%	13898.0	29.60%
ERF10(AP2EREBP)/col-ERF10-DAP-Seq(GSE60143)/Homer	RTGGCGGCGG	1e0	-1.140e-04	1.0000	26.0	5.56%	4800.0	10.22%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-6.700e-05	1.0000	26.0	5.56%	4896.0	10.43%
At5g04390(C2H2)/col200-At5g04390-DAP-Seq(GSE60143)/Homer	AGTGANDN	1e0	-5.700e-05	1.0000	182.0	38.89%	22372.3	47.64%
MYB73(MYB)/col-MYB73-DAP-Seq(GSE60143)/Homer	NNNNHAACNGHHDHN	1e0	-5.200e-05	1.0000	104.0	22.22%	14143.8	30.12%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-5.200e-05	1.0000	130.0	27.78%	16965.7	36.13%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-5.100e-05	1.0000	26.0	5.56%	4943.6	10.53%
At5g08750(C3H)/col-At5g08750-DAP-Seq(GSE60143)/Homer	NWDTTGCGGCTR	1e0	-5.000e-05	1.0000	26.0	5.56%	4947.2	10.54%
bZIP18(bZIP)/colamp-bZIP18-DAP-Seq(GSE60143)/Homer	KGMCAGCTND	1e0	-4.800e-05	1.0000	104.0	22.22%	14167.9	30.17%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-4.400e-05	1.0000	26.0	5.56%	4968.8	10.58%
AT1G69570(C2C2dof)/col-AT1G69570-DAP-Seq(GSE60143)/Homer	WAAAAGTGHH	1e0	-4.200e-05	1.0000	26.0	5.56%	4976.4	10.60%
ANAC071(NAC)/col-ANAC071-DAP-Seq(GSE60143)/Homer	DNCKTNDNNNHNAAG	1e0	-2.900e-05	1.0000	26.0	5.56%	5042.4	10.74%
At1g36060(AP2EREBP)/colamp-At1g36060-DAP-Seq(GSE60143)/Homer	NNWWKGTCGGTG	1e0	-2.800e-05	1.0000	26.0	5.56%	5049.7	10.75%
VND2(NAC)/col-VND2-DAP-Seq(GSE60143)/Homer	DNCKTNNNNNNNAAG	1e0	-2.300e-05	1.0000	26.0	5.56%	5081.0	10.82%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e0	-1.900e-05	1.0000	26.0	5.56%	5115.2	10.89%
SeqBias: A/T bias	WWWWWWWWWW	1e0	-1.600e-05	1.0000	416.0	88.89%	44075.2	93.86%
GATA20(C2C2gata)/colamp-GATA20-DAP-Seq(GSE60143)/Homer	TNGATCNDNM	1e0	-1.500e-05	1.0000	130.0	27.78%	17271.6	36.78%
SMB(NAC)/colamp-SMB-DAP-Seq(GSE60143)/Homer	CTTVNNNNDBAAGHW	1e0	-1.400e-05	1.0000	26.0	5.56%	5164.2	11.00%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-1.100e-05	1.0000	52.0	11.11%	8511.4	18.13%
GATA4(C2C2gata)/col-GATA4-DAP-Seq(GSE60143)/Homer	DDWTYAGATCTR	1e0	-8.000e-06	1.0000	26.0	5.56%	5251.2	11.18%
At4g38000(C2C2dof)/col-At4g38000-DAP-Seq(GSE60143)/Homer	WWWTWACTTTTT	1e0	-8.000e-06	1.0000	26.0	5.56%	5264.1	11.21%
SPL15(SBP)/colamp-SPL15-DAP-Seq(GSE60143)/Homer	WDWMMGTACADW	1e0	-7.000e-06	1.0000	52.0	11.11%	8606.7	18.33%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-7.000e-06	1.0000	26.0	5.56%	5290.8	11.27%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-3.000e-06	1.0000	26.0	5.56%	5435.7	11.58%
AT5G02460(C2C2dof)/col-AT5G02460-DAP-Seq(GSE60143)/Homer	CHCCTTTT	1e0	-1.000e-06	1.0000	52.0	11.11%	8962.5	19.09%
DEAR2(AP2EREBP)/colamp-DEAR2-DAP-Seq(GSE60143)/Homer	HCACCGACAWHD	1e0	-1.000e-06	1.0000	52.0	11.11%	9034.7	19.24%
CRC(C2C2YABBY)/col-CRC-DAP-Seq(GSE60143)/Homer	TWATSATA	1e0	-1.000e-06	1.0000	52.0	11.11%	9043.1	19.26%
ERF115(AP2EREBP)/colamp-ERF115-DAP-Seq(GSE60143)/Homer	WTKRCGGCGB	1e0	-1.000e-06	1.0000	52.0	11.11%	9062.2	19.30%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e0	-1.000e-06	1.0000	26.0	5.56%	5678.0	12.09%
At4g16750(AP2EREBP)/col-At4g16750-DAP-Seq(GSE60143)/Homer	HACCGACAHA	1e0	-0.000e+00	1.0000	26.0	5.56%	5812.1	12.38%
TF3A(C2H2)/col-TF3A-DAP-Seq(GSE60143)/Homer	NNDDGAGGAGGWNNN	1e0	-0.000e+00	1.0000	26.0	5.56%	5941.7	12.65%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-0.000e+00	1.0000	26.0	5.56%	5992.1	12.76%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-0.000e+00	1.0000	26.0	5.56%	5995.2	12.77%
VND6(NAC)/col-VND6-DAP-Seq(GSE60143)/Homer	DCTTNHTTTTYAMGY	1e0	-0.000e+00	1.0000	26.0	5.56%	6043.4	12.87%
SUT1?/SacCer-Promoters/Homer	CCCCGCGC	1e0	-0.000e+00	1.0000	104.0	22.22%	15691.9	33.42%
Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer	RGAGAGAG	1e0	-0.000e+00	1.0000	52.0	11.11%	9702.7	20.66%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-0.000e+00	1.0000	26.0	5.56%	6286.9	13.39%
Replumless(BLH)/Arabidopsis-RPL.GFP-ChIP-Seq(GSE78727)/Homer	HGTCWHATCA	1e0	-0.000e+00	1.0000	26.0	5.56%	6295.5	13.41%
OBP1(C2C2dof)/col-OBP1-DAP-Seq(GSE60143)/Homer	NHHACTTTWT	1e0	-0.000e+00	1.0000	78.0	16.67%	13101.1	27.90%
ANAC070(NAC)/colamp-ANAC070-DAP-Seq(GSE60143)/Homer	CTTRHDNHNBAAGHW	1e0	-0.000e+00	1.0000	26.0	5.56%	6471.3	13.78%
SeqBias: GA-repeat	GAGAGAGAGA	1e0	-0.000e+00	1.0000	182.0	38.89%	24609.1	52.41%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-0.000e+00	1.0000	26.0	5.56%	6819.9	14.52%
Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer	TATTGAYY	1e0	-0.000e+00	1.0000	26.0	5.56%	6965.9	14.83%
ERF15(AP2EREBP)/colamp-ERF15-DAP-Seq(GSE60143)/Homer	WDHAGCMGCCAT	1e0	-0.000e+00	1.0000	26.0	5.56%	7078.7	15.07%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-0.000e+00	1.0000	26.0	5.56%	7158.3	15.24%
CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer	TATCGATNAN	1e0	-0.000e+00	1.0000	26.0	5.56%	7281.8	15.51%
SPL9(SBP)/colamp-SPL9-DAP-Seq(GSE60143)/Homer	BTGTACTT	1e0	-0.000e+00	1.0000	52.0	11.11%	11242.4	23.94%
At3g60580(C2H2)/col-At3g60580-DAP-Seq(GSE60143)/Homer	WTTYTACT	1e0	-0.000e+00	1.0000	156.0	33.33%	23280.6	49.58%
PABPC1(?)/MEL-PABC1-CLIP-Seq(GSE69755)/Homer	HAATAAAGNN	1e0	-0.000e+00	1.0000	26.0	5.56%	7775.4	16.56%
AtHB32(ZFHD)/col200-AtHB32-DAP-Seq(GSE60143)/Homer	CGAATTAT	1e0	-0.000e+00	1.0000	26.0	5.56%	8230.7	17.53%
NAM(NAC)/col-NAM-DAP-Seq(GSE60143)/Homer	RGTTRCGTRW	1e0	-0.000e+00	1.0000	26.0	5.56%	8364.5	17.81%
At5g62940(C2C2dof)/col-At5g62940-DAP-Seq(GSE60143)/Homer	WHWHHACTTTTT	1e0	-0.000e+00	1.0000	78.0	16.67%	15471.9	32.95%
MYB65(MYB)/colamp-MYB65-DAP-Seq(GSE60143)/Homer	RACNGTTA	1e0	-0.000e+00	1.0000	26.0	5.56%	8447.1	17.99%
ANAC046(NAC)/colamp-ANAC046-DAP-Seq(GSE60143)/Homer	ACACGYWAYC	1e0	-0.000e+00	1.0000	52.0	11.11%	12376.3	26.36%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	0.000e+00	1.0000	0.0	0.00%	848.4	1.81%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	0.000e+00	1.0000	0.0	0.00%	526.8	1.12%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e0	0.000e+00	1.0000	0.0	0.00%	2212.7	4.71%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	0.000e+00	1.0000	0.0	0.00%	178.1	0.38%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	0.000e+00	1.0000	0.0	0.00%	372.4	0.79%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e0	0.000e+00	1.0000	0.0	0.00%	2375.4	5.06%
Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer	SSRGCAGCTGCH	1e0	0.000e+00	1.0000	0.0	0.00%	1741.5	3.71%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e0	0.000e+00	1.0000	0.0	0.00%	1262.3	2.69%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e0	0.000e+00	1.0000	0.0	0.00%	1704.6	3.63%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e0	0.000e+00	1.0000	0.0	0.00%	1952.6	4.16%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e0	0.000e+00	1.0000	0.0	0.00%	133.2	0.28%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	424.8	0.90%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	0.000e+00	1.0000	0.0	0.00%	395.0	0.84%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e0	0.000e+00	1.0000	0.0	0.00%	2147.5	4.57%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	0.000e+00	1.0000	0.0	0.00%	1349.1	2.87%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e0	0.000e+00	1.0000	0.0	0.00%	96.1	0.20%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	0.000e+00	1.0000	0.0	0.00%	612.3	1.30%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	0.000e+00	1.0000	0.0	0.00%	1199.8	2.56%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	0.000e+00	1.0000	0.0	0.00%	3363.3	7.16%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	0.000e+00	1.0000	0.0	0.00%	495.0	1.05%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	0.000e+00	1.0000	0.0	0.00%	1257.6	2.68%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	0.000e+00	1.0000	0.0	0.00%	3212.1	6.84%
CREB5(bZIP)/LNCaP-CREB5.V5-ChIP-Seq(GSE137775)/Homer	VVATGACGTCAT	1e0	0.000e+00	1.0000	0.0	0.00%	1607.1	3.42%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	0.000e+00	1.0000	0.0	0.00%	1074.4	2.29%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e0	0.000e+00	1.0000	0.0	0.00%	75.2	0.16%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	0.000e+00	1.0000	0.0	0.00%	26.3	0.06%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	0.000e+00	1.0000	0.0	0.00%	258.3	0.55%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	0.000e+00	1.0000	0.0	0.00%	1135.8	2.42%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	0.000e+00	1.0000	0.0	0.00%	886.2	1.89%
RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	303.9	0.65%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	0.000e+00	1.0000	0.0	0.00%	34.6	0.07%
DUX(Homeobox)/C2C12-Dux-ChIP-Seq(GSE87279)/Homer	BCWGATTCAATCAAN	1e0	0.000e+00	1.0000	0.0	0.00%	33.3	0.07%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	0.000e+00	1.0000	0.0	0.00%	2071.9	4.41%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	0.000e+00	1.0000	0.0	0.00%	620.1	1.32%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	0.000e+00	1.0000	0.0	0.00%	1275.2	2.72%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	0.000e+00	1.0000	0.0	0.00%	2138.3	4.55%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	0.000e+00	1.0000	0.0	0.00%	1088.8	2.32%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	0.000e+00	1.0000	0.0	0.00%	377.8	0.80%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	0.000e+00	1.0000	0.0	0.00%	325.3	0.69%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	0.000e+00	1.0000	0.0	0.00%	2503.0	5.33%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	0.000e+00	1.0000	0.0	0.00%	210.2	0.45%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	0.000e+00	1.0000	0.0	0.00%	11.5	0.02%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e0	0.000e+00	1.0000	0.0	0.00%	274.0	0.58%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	0.000e+00	1.0000	0.0	0.00%	143.9	0.31%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e0	0.000e+00	1.0000	0.0	0.00%	5098.0	10.86%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	0.000e+00	1.0000	0.0	0.00%	155.1	0.33%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e0	0.000e+00	1.0000	0.0	0.00%	2806.4	5.98%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e0	0.000e+00	1.0000	0.0	0.00%	2287.3	4.87%
Elf4(ETS)/BMDM-Elf4-ChIP-Seq(GSE88699)/Homer	ACTTCCKGKT	1e0	0.000e+00	1.0000	0.0	0.00%	3757.2	8.00%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e0	0.000e+00	1.0000	0.0	0.00%	2674.0	5.69%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e0	0.000e+00	1.0000	0.0	0.00%	4273.5	9.10%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	0.000e+00	1.0000	0.0	0.00%	320.3	0.68%
ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer	GTGACCTTGRVN	1e0	0.000e+00	1.0000	0.0	0.00%	2193.5	4.67%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	0.000e+00	1.0000	0.0	0.00%	476.0	1.01%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	0.000e+00	1.0000	0.0	0.00%	1899.4	4.05%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e0	0.000e+00	1.0000	0.0	0.00%	3587.9	7.64%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e0	0.000e+00	1.0000	0.0	0.00%	482.9	1.03%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	0.000e+00	1.0000	0.0	0.00%	203.0	0.43%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e0	0.000e+00	1.0000	0.0	0.00%	1654.0	3.52%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	0.000e+00	1.0000	0.0	0.00%	177.5	0.38%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e0	0.000e+00	1.0000	0.0	0.00%	5272.1	11.23%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer	NNAYTTCCTGHN	1e0	0.000e+00	1.0000	0.0	0.00%	2433.7	5.18%
ETV4(ETS)/HepG2-ETV4-ChIP-Seq(ENCODE)/Homer	ACCGGAAGTG	1e0	0.000e+00	1.0000	0.0	0.00%	5155.8	10.98%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e0	0.000e+00	1.0000	0.0	0.00%	2005.6	4.27%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e0	0.000e+00	1.0000	0.0	0.00%	1921.6	4.09%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e0	0.000e+00	1.0000	0.0	0.00%	6350.7	13.52%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e0	0.000e+00	1.0000	0.0	0.00%	825.8	1.76%
Fos(bZIP)/TSC-Fos-ChIP-Seq(GSE110950)/Homer	NDATGASTCAYN	1e0	0.000e+00	1.0000	0.0	0.00%	2125.6	4.53%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e0	0.000e+00	1.0000	0.0	0.00%	1866.4	3.97%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	0.000e+00	1.0000	0.0	0.00%	745.6	1.59%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e0	0.000e+00	1.0000	0.0	0.00%	3593.7	7.65%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	0.000e+00	1.0000	0.0	0.00%	495.1	1.05%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	0.000e+00	1.0000	0.0	0.00%	458.3	0.98%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	0.000e+00	1.0000	0.0	0.00%	923.0	1.97%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	0.000e+00	1.0000	0.0	0.00%	435.6	0.93%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	0.000e+00	1.0000	0.0	0.00%	256.9	0.55%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	0.000e+00	1.0000	0.0	0.00%	2061.5	4.39%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	0.000e+00	1.0000	0.0	0.00%	33.6	0.07%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	0.000e+00	1.0000	0.0	0.00%	129.0	0.27%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e0	0.000e+00	1.0000	0.0	0.00%	52.0	0.11%
Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer	YSTGGGTGGTCT	1e0	0.000e+00	1.0000	0.0	0.00%	315.7	0.67%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	0.000e+00	1.0000	0.0	0.00%	202.0	0.43%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	0.000e+00	1.0000	0.0	0.00%	232.7	0.50%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	0.000e+00	1.0000	0.0	0.00%	574.0	1.22%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	0.000e+00	1.0000	0.0	0.00%	752.4	1.60%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	0.000e+00	1.0000	0.0	0.00%	1429.2	3.04%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	0.000e+00	1.0000	0.0	0.00%	2095.1	4.46%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	0.000e+00	1.0000	0.0	0.00%	711.4	1.51%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	0.000e+00	1.0000	0.0	0.00%	578.9	1.23%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	0.000e+00	1.0000	0.0	0.00%	930.7	1.98%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	0.000e+00	1.0000	0.0	0.00%	673.7	1.43%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	0.000e+00	1.0000	0.0	0.00%	1031.1	2.20%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	0.000e+00	1.0000	0.0	0.00%	418.6	0.89%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	627.8	1.34%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	0.000e+00	1.0000	0.0	0.00%	476.2	1.01%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	0.000e+00	1.0000	0.0	0.00%	472.0	1.01%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e0	0.000e+00	1.0000	0.0	0.00%	1240.3	2.64%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	0.000e+00	1.0000	0.0	0.00%	2478.6	5.28%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e0	0.000e+00	1.0000	0.0	0.00%	1315.2	2.80%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	0.000e+00	1.0000	0.0	0.00%	241.4	0.51%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e0	0.000e+00	1.0000	0.0	0.00%	509.6	1.09%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e0	0.000e+00	1.0000	0.0	0.00%	1780.7	3.79%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	0.000e+00	1.0000	0.0	0.00%	1050.3	2.24%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	0.000e+00	1.0000	0.0	0.00%	368.5	0.78%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e0	0.000e+00	1.0000	0.0	0.00%	423.8	0.90%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e0	0.000e+00	1.0000	0.0	0.00%	1412.5	3.01%
KLF1(Zf)/HUDEP2-KLF1-CutnRun(GSE136251)/Homer	VDGGGYGGGGCY	1e0	0.000e+00	1.0000	0.0	0.00%	691.6	1.47%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e0	0.000e+00	1.0000	0.0	0.00%	253.8	0.54%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	0.000e+00	1.0000	0.0	0.00%	262.5	0.56%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e0	0.000e+00	1.0000	0.0	0.00%	1247.9	2.66%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e0	0.000e+00	1.0000	0.0	0.00%	180.1	0.38%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	0.000e+00	1.0000	0.0	0.00%	2538.4	5.41%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	0.000e+00	1.0000	0.0	0.00%	1628.5	3.47%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	72.5	0.15%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e0	0.000e+00	1.0000	0.0	0.00%	1787.1	3.81%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e0	0.000e+00	1.0000	0.0	0.00%	953.6	2.03%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	0.000e+00	1.0000	0.0	0.00%	933.5	1.99%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	0.000e+00	1.0000	0.0	0.00%	673.5	1.43%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e0	0.000e+00	1.0000	0.0	0.00%	3075.1	6.55%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	0.000e+00	1.0000	0.0	0.00%	1445.1	3.08%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e0	0.000e+00	1.0000	0.0	0.00%	595.0	1.27%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	0.000e+00	1.0000	0.0	0.00%	1163.6	2.48%
MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer	TTCAAAWTAAAAGTC	1e0	0.000e+00	1.0000	0.0	0.00%	916.6	1.95%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	0.000e+00	1.0000	0.0	0.00%	1344.4	2.86%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	0.000e+00	1.0000	0.0	0.00%	1746.2	3.72%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	0.000e+00	1.0000	0.0	0.00%	1408.9	3.00%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	0.000e+00	1.0000	0.0	0.00%	171.6	0.37%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	0.000e+00	1.0000	0.0	0.00%	389.5	0.83%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	0.000e+00	1.0000	0.0	0.00%	464.2	0.99%
NFE2L2(bZIP)/HepG2-NFE2L2-ChIP-Seq(Encode)/Homer	AWWWTGCTGAGTCAT	1e0	0.000e+00	1.0000	0.0	0.00%	133.0	0.28%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e0	0.000e+00	1.0000	0.0	0.00%	119.4	0.25%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e0	0.000e+00	1.0000	0.0	0.00%	122.3	0.26%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	1381.8	2.94%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	0.000e+00	1.0000	0.0	0.00%	37.1	0.08%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e0	0.000e+00	1.0000	0.0	0.00%	98.8	0.21%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	0.000e+00	1.0000	0.0	0.00%	125.4	0.27%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	0.000e+00	1.0000	0.0	0.00%	621.2	1.32%
Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer	GATTTGCATA	1e0	0.000e+00	1.0000	0.0	0.00%	1365.9	2.91%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	0.000e+00	1.0000	0.0	0.00%	1233.2	2.63%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	0.000e+00	1.0000	0.0	0.00%	1931.7	4.11%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	0.000e+00	1.0000	0.0	0.00%	476.6	1.01%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	0.000e+00	1.0000	0.0	0.00%	666.0	1.42%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e0	0.000e+00	1.0000	0.0	0.00%	1611.5	3.43%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	0.000e+00	1.0000	0.0	0.00%	54.0	0.11%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	0.000e+00	1.0000	0.0	0.00%	24.9	0.05%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	0.000e+00	1.0000	0.0	0.00%	543.2	1.16%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e0	0.000e+00	1.0000	0.0	0.00%	102.2	0.22%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	0.000e+00	1.0000	0.0	0.00%	187.6	0.40%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	0.000e+00	1.0000	0.0	0.00%	8.3	0.02%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	0.000e+00	1.0000	0.0	0.00%	187.6	0.40%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	0.000e+00	1.0000	0.0	0.00%	731.5	1.56%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	0.000e+00	1.0000	0.0	0.00%	77.3	0.16%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	0.000e+00	1.0000	0.0	0.00%	939.3	2.00%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	0.000e+00	1.0000	0.0	0.00%	776.1	1.65%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	0.000e+00	1.0000	0.0	0.00%	262.5	0.56%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	0.000e+00	1.0000	0.0	0.00%	258.2	0.55%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	0.000e+00	1.0000	0.0	0.00%	132.3	0.28%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	0.000e+00	1.0000	0.0	0.00%	160.1	0.34%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	0.000e+00	1.0000	0.0	0.00%	684.7	1.46%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	0.000e+00	1.0000	0.0	0.00%	322.9	0.69%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	0.000e+00	1.0000	0.0	0.00%	43.5	0.09%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	0.000e+00	1.0000	0.0	0.00%	364.4	0.78%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	0.000e+00	1.0000	0.0	0.00%	650.7	1.39%
Phox2b(Homeobox)/CLBGA-PHOX2B-ChIP-Seq(GSE90683)/Homer	TTAATTNAATTA	1e0	0.000e+00	1.0000	0.0	0.00%	1362.6	2.90%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e0	0.000e+00	1.0000	0.0	0.00%	561.7	1.20%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	0.000e+00	1.0000	0.0	0.00%	410.9	0.88%
PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer	VNAGGKCAAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	2226.6	4.74%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	0.000e+00	1.0000	0.0	0.00%	1644.1	3.50%
PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer	YCCDNTCCAGGTTTT	1e0	0.000e+00	1.0000	0.0	0.00%	3277.9	6.98%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	0.000e+00	1.0000	0.0	0.00%	1810.6	3.86%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	0.000e+00	1.0000	0.0	0.00%	1332.4	2.84%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e0	0.000e+00	1.0000	0.0	0.00%	633.4	1.35%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e0	0.000e+00	1.0000	0.0	0.00%	4408.3	9.39%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e0	0.000e+00	1.0000	0.0	0.00%	1250.2	2.66%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	48.0	0.10%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	0.000e+00	1.0000	0.0	0.00%	427.4	0.91%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	0.000e+00	1.0000	0.0	0.00%	7.4	0.02%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	136.0	0.29%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	0.000e+00	1.0000	0.0	0.00%	784.2	1.67%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	0.000e+00	1.0000	0.0	0.00%	2507.4	5.34%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e0	0.000e+00	1.0000	0.0	0.00%	13.1	0.03%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	407.2	0.87%
RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer	WAABTAGGTCAV	1e0	0.000e+00	1.0000	0.0	0.00%	325.1	0.69%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	407.2	0.87%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e0	0.000e+00	1.0000	0.0	0.00%	2864.9	6.10%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	0.000e+00	1.0000	0.0	0.00%	3101.9	6.61%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e0	0.000e+00	1.0000	0.0	0.00%	2252.7	4.80%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	1825.7	3.89%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	0.000e+00	1.0000	0.0	0.00%	1132.7	2.41%
Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer	TGWAAYCTGABACCB	1e0	0.000e+00	1.0000	0.0	0.00%	160.4	0.34%
Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer	TRCACCTGCY	1e0	0.000e+00	1.0000	0.0	0.00%	1318.9	2.81%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e0	0.000e+00	1.0000	0.0	0.00%	742.9	1.58%
Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer	VVRRAACAATGG	1e0	0.000e+00	1.0000	0.0	0.00%	1588.3	3.38%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e0	0.000e+00	1.0000	0.0	0.00%	62.7	0.13%
Sp2(Zf)/HEK293-Sp2.eGFP-ChIP-Seq(Encode)/Homer	YGGCCCCGCCCC	1e0	0.000e+00	1.0000	0.0	0.00%	1716.3	3.66%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e0	0.000e+00	1.0000	0.0	0.00%	1218.1	2.59%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e0	0.000e+00	1.0000	0.0	0.00%	663.1	1.41%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	0.000e+00	1.0000	0.0	0.00%	205.8	0.44%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	38.9	0.08%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	0.000e+00	1.0000	0.0	0.00%	3900.9	8.31%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	0.000e+00	1.0000	0.0	0.00%	277.2	0.59%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	0.000e+00	1.0000	0.0	0.00%	539.9	1.15%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e0	0.000e+00	1.0000	26.0	5.56%	9270.1	19.74%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e0	0.000e+00	1.0000	0.0	0.00%	1425.2	3.04%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e0	0.000e+00	1.0000	0.0	0.00%	1567.6	3.34%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	0.000e+00	1.0000	0.0	0.00%	1195.6	2.55%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	0.000e+00	1.0000	0.0	0.00%	325.8	0.69%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	0.000e+00	1.0000	0.0	0.00%	482.0	1.03%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e0	0.000e+00	1.0000	0.0	0.00%	341.1	0.73%
THRb(NR)/HepG2-THRb.Flag-ChIP-Seq(Encode)/Homer	GGTCACCTGAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	671.5	1.43%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	0.000e+00	1.0000	0.0	0.00%	289.1	0.62%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	134.2	0.29%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e0	0.000e+00	1.0000	0.0	0.00%	145.7	0.31%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	0.000e+00	1.0000	0.0	0.00%	1524.3	3.25%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	0.000e+00	1.0000	0.0	0.00%	396.7	0.84%
Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer	HAWGRGGCCM	1e0	0.000e+00	1.0000	0.0	0.00%	4013.6	8.55%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e0	0.000e+00	1.0000	0.0	0.00%	784.3	1.67%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	0.000e+00	1.0000	0.0	0.00%	125.6	0.27%
ZEB2(Zf)/SNU398-ZEB2-ChIP-Seq(GSE103048)/Homer	GNMCAGGTGTGC	1e0	0.000e+00	1.0000	0.0	0.00%	1460.4	3.11%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e0	0.000e+00	1.0000	0.0	0.00%	42.5	0.09%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	0.000e+00	1.0000	0.0	0.00%	0.4	0.00%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	0.000e+00	1.0000	0.0	0.00%	130.5	0.28%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	0.000e+00	1.0000	0.0	0.00%	1398.8	2.98%
Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer	CHCAGCRGGRGG	1e0	0.000e+00	1.0000	0.0	0.00%	327.8	0.70%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e0	0.000e+00	1.0000	0.0	0.00%	339.9	0.72%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e0	0.000e+00	1.0000	0.0	0.00%	1045.3	2.23%
ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer	GCACAYAGTAGGKCY	1e0	0.000e+00	1.0000	0.0	0.00%	27.7	0.06%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	0.000e+00	1.0000	0.0	0.00%	263.0	0.56%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	0.000e+00	1.0000	0.0	0.00%	101.0	0.22%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	0.000e+00	1.0000	0.0	0.00%	4.0	0.01%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	0.000e+00	1.0000	0.0	0.00%	1672.6	3.56%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e0	0.000e+00	1.0000	0.0	0.00%	162.6	0.35%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	0.000e+00	1.0000	0.0	0.00%	222.0	0.47%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	0.000e+00	1.0000	0.0	0.00%	70.2	0.15%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	0.000e+00	1.0000	0.0	0.00%	1412.5	3.01%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	0.000e+00	1.0000	0.0	0.00%	1162.0	2.47%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	0.000e+00	1.0000	0.0	0.00%	58.4	0.12%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	0.000e+00	1.0000	0.0	0.00%	9.8	0.02%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	0.000e+00	1.0000	0.0	0.00%	261.6	0.56%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e0	0.000e+00	1.0000	0.0	0.00%	448.0	0.95%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	0.000e+00	1.0000	0.0	0.00%	177.6	0.38%
ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer	RHHCAGAGAGGB	1e0	0.000e+00	1.0000	0.0	0.00%	42.9	0.09%
ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer	CTGCCWVCTTTTRTA	1e0	0.000e+00	1.0000	0.0	0.00%	1618.8	3.45%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	0.000e+00	1.0000	0.0	0.00%	108.1	0.23%
AARE(HLH)/mES-cMyc-ChIP-Seq/Homer	GATTGCATCA	1e0	0.000e+00	1.0000	0.0	0.00%	601.6	1.28%
SeqBias: CG-repeat	CGCGCGCGCG	1e0	0.000e+00	1.0000	0.0	0.00%	1869.9	3.98%
dHNF4(NR)/Fly-HNF4-ChIP-Seq(GSE73675)/Homer	GGTCCAAAGTCCAMT	1e0	0.000e+00	1.0000	0.0	0.00%	160.1	0.34%
DREF/Drosophila-Promoters/Homer	AVYTATCGATAD	1e0	0.000e+00	1.0000	0.0	0.00%	281.1	0.60%
E-box/Drosophila-Promoters/Homer	AACAGCTGTTHN	1e0	0.000e+00	1.0000	0.0	0.00%	447.4	0.95%
Unknown1(NR/Ini-like)/Drosophila-Promoters/Homer	MYGGTCACACTG	1e0	0.000e+00	1.0000	0.0	0.00%	505.5	1.08%
M1BP(Zf)/S2R+-M1BP-ChIP-Seq(GSE49842)/Homer	CAGTGTGACCGT	1e0	0.000e+00	1.0000	0.0	0.00%	546.7	1.16%
TATA-box/Drosophila-Promoters/Homer	CTATAAAAGCSV	1e0	0.000e+00	1.0000	0.0	0.00%	313.1	0.67%
Unknown3/Drosophila-Promoters/Homer	ACVAKCTGGCAGCGC	1e0	0.000e+00	1.0000	0.0	0.00%	91.8	0.20%
Unknown4/Drosophila-Promoters/Homer	AAAAATACCRMA	1e0	0.000e+00	1.0000	0.0	0.00%	549.1	1.17%
Unknown5/Drosophila-Promoters/Homer	GCTGATAASV	1e0	0.000e+00	1.0000	0.0	0.00%	3830.1	8.16%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	0.000e+00	1.0000	0.0	0.00%	2043.8	4.35%
AGL13(MADS)/col-AGL13-DAP-Seq(GSE60143)/Homer	TWCCAWWTWTGGWAA	1e0	0.000e+00	1.0000	0.0	0.00%	174.3	0.37%
AGL15(MADS)/col-AGL15-DAP-Seq(GSE60143)/Homer	TTTCCHWATWDGGAA	1e0	0.000e+00	1.0000	0.0	0.00%	580.9	1.24%
AGL16(MADS)/col-AGL16-DAP-Seq(GSE60143)/Homer	TWCCHWATWDGGAAA	1e0	0.000e+00	1.0000	0.0	0.00%	341.2	0.73%
AGL25(MADS)/colamp-AGL25-DAP-Seq(GSE60143)/Homer	TTTCCATWTWTGGAA	1e0	0.000e+00	1.0000	0.0	0.00%	199.6	0.43%
AGL6(MADS)/col-AGL6-DAP-Seq(GSE60143)/Homer	TTWCCWWAWWDGGWA	1e0	0.000e+00	1.0000	0.0	0.00%	516.6	1.10%
AGL95(ND)/col-AGL95-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	482.2	1.03%
ANAC004(NAC)/colamp-ANAC004-DAP-Seq(GSE60143)/Homer	WNCTTVYNNNRBAAG	1e0	0.000e+00	1.0000	0.0	0.00%	1580.4	3.37%
ANAC005(NAC)/col-ANAC005-DAP-Seq(GSE60143)/Homer	WVCTTVTWNHABAAG	1e0	0.000e+00	1.0000	0.0	0.00%	2171.9	4.63%
ANAC011(NAC)/col-ANAC011-DAP-Seq(GSE60143)/Homer	TDCTTGYRNNDCAAG	1e0	0.000e+00	1.0000	0.0	0.00%	1710.5	3.64%
ANAC017(NAC)/colamp-ANAC017-DAP-Seq(GSE60143)/Homer	TMCTTGNNNNNCAAG	1e0	0.000e+00	1.0000	0.0	0.00%	759.5	1.62%
ANAC020(NAC)/col-ANAC020-DAP-Seq(GSE60143)/Homer	DVCKTGHNNNDCAAG	1e0	0.000e+00	1.0000	0.0	0.00%	3529.0	7.52%
ANAC038(NAC)/col-ANAC038-DAP-Seq(GSE60143)/Homer	ACACGTWAYC	1e0	0.000e+00	1.0000	52.0	11.11%	12893.7	27.46%
ANAC050(NAC)/colamp-ANAC050-DAP-Seq(GSE60143)/Homer	WNCTTGNNNNNCAAG	1e0	0.000e+00	1.0000	0.0	0.00%	3134.4	6.68%
ANAC053(NAC)/colamp-ANAC053-DAP-Seq(GSE60143)/Homer	TDCTTGNNNNNCAAG	1e0	0.000e+00	1.0000	0.0	0.00%	2982.5	6.35%
ANAC058(NAC)/col-ANAC058-DAP-Seq(GSE60143)/Homer	TWCTTGTDNNACAAG	1e0	0.000e+00	1.0000	0.0	0.00%	3247.7	6.92%
ANAC062(NAC)/colamp-ANAC062-DAP-Seq(GSE60143)/Homer	TACTTANTNWNYAAG	1e0	0.000e+00	1.0000	0.0	0.00%	1758.7	3.75%
ANAC083(NAC)/col-ANAC083-DAP-Seq(GSE60143)/Homer	CKTRWNNNWYAMGTA	1e0	0.000e+00	1.0000	0.0	0.00%	4619.6	9.84%
ANAC087(NAC)/col-ANAC087-DAP-Seq(GSE60143)/Homer	WVCKTGHNNNWCAMG	1e0	0.000e+00	1.0000	0.0	0.00%	2023.3	4.31%
ANAC092(NAC)/colamp-ANAC092-DAP-Seq(GSE60143)/Homer	WRCKTGWNNNWCAMG	1e0	0.000e+00	1.0000	0.0	0.00%	2640.7	5.62%
ANAC096(NAC)/colamp-ANAC096-DAP-Seq(GSE60143)/Homer	TACTTGWNNNWCAAG	1e0	0.000e+00	1.0000	0.0	0.00%	3449.3	7.35%
AT1G01250(AP2EREBP)/col-AT1G01250-DAP-Seq(GSE60143)/Homer	YCACCGACAHTW	1e0	0.000e+00	1.0000	0.0	0.00%	651.3	1.39%
AT1G10720(BSD)/col-AT1G10720-DAP-Seq(GSE60143)/Homer	TTCTAGAAKCTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	93.3	0.20%
AT1G12630(AP2EREBP)/colamp-AT1G12630-DAP-Seq(GSE60143)/Homer	TGTCGGCA	1e0	0.000e+00	1.0000	0.0	0.00%	2694.8	5.74%
At1g13300(G2like)/col-At1g13300-DAP-Seq(GSE60143)/Homer	GAATCTWAGATTCYN	1e0	0.000e+00	1.0000	0.0	0.00%	76.8	0.16%
At1g14580(C2H2)/colamp-At1g14580-DAP-Seq(GSE60143)/Homer	CASAAAAMGACAAAA	1e0	0.000e+00	1.0000	0.0	0.00%	787.2	1.68%
AT1G19040(NAC)/col-AT1G19040-DAP-Seq(GSE60143)/Homer	CTTGNDNHNCAAGYW	1e0	0.000e+00	1.0000	0.0	0.00%	707.1	1.51%
At1g22810(AP2EREBP)/colamp-At1g22810-DAP-Seq(GSE60143)/Homer	BCACCGACANNN	1e0	0.000e+00	1.0000	0.0	0.00%	3419.1	7.28%
AT1G23810(Orphan)/col-AT1G23810-DAP-Seq(GSE60143)/Homer	TTCTAGAAGSTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	158.2	0.34%
AT1G24250(Orphan)/col-AT1G24250-DAP-Seq(GSE60143)/Homer	KTDGTTGGTDGTTGG	1e0	0.000e+00	1.0000	0.0	0.00%	1819.1	3.87%
At1g69690(TCP)/colamp-At1g69690-DAP-Seq(GSE60143)/Homer	NHGTGGGGCCCACHW	1e0	0.000e+00	1.0000	0.0	0.00%	469.4	1.00%
At1g72010(TCP)/colamp-At1g72010-DAP-Seq(GSE60143)/Homer	GGDCCCAC	1e0	0.000e+00	1.0000	0.0	0.00%	784.7	1.67%
At1g77640(AP2EREBP)/col-At1g77640-DAP-Seq(GSE60143)/Homer	TGTCGGTGGA	1e0	0.000e+00	1.0000	0.0	0.00%	1730.7	3.69%
AT2G01818(PLATZ)/col-AT2G01818-DAP-Seq(GSE60143)/Homer	TCTAGAABSTTC	1e0	0.000e+00	1.0000	0.0	0.00%	705.0	1.50%
AT2G28920(ND)/col-AT2G28920-DAP-Seq(GSE60143)/Homer	WAGATATTTWTW	1e0	0.000e+00	1.0000	0.0	0.00%	1218.7	2.60%
AT2G31460(REMB3)/col-AT2G31460-DAP-Seq(GSE60143)/Homer	WNWARWDGAAATGAT	1e0	0.000e+00	1.0000	0.0	0.00%	1246.9	2.66%
At2g41835(C2H2)/col-At2g41835-DAP-Seq(GSE60143)/Homer	TTTGAAAA	1e0	0.000e+00	1.0000	0.0	0.00%	2312.6	4.92%
At2g44940(AP2EREBP)/colamp-At2g44940-DAP-Seq(GSE60143)/Homer	NYACCGACAHNNNNN	1e0	0.000e+00	1.0000	0.0	0.00%	1420.8	3.03%
At2g45680(TCP)/colamp-At2g45680-DAP-Seq(GSE60143)/Homer	GTGGGNCCCACNDND	1e0	0.000e+00	1.0000	0.0	0.00%	181.5	0.39%
At3g09600(MYBrelated)/colamp-At3g09600-DAP-Seq(GSE60143)/Homer	AAAATATCTT	1e0	0.000e+00	1.0000	0.0	0.00%	2241.1	4.77%
AT3G10113(MYBrelated)/col-AT3G10113-DAP-Seq(GSE60143)/Homer	WNAAATATCWWN	1e0	0.000e+00	1.0000	0.0	0.00%	2427.7	5.17%
AT3G10580(MYBrelated)/colamp-AT3G10580-DAP-Seq(GSE60143)/Homer	TACCTAACWNHW	1e0	0.000e+00	1.0000	0.0	0.00%	1964.6	4.18%
AT3G16280(AP2EREBP)/colamp-AT3G16280-DAP-Seq(GSE60143)/Homer	HCACCGACAHHDHHN	1e0	0.000e+00	1.0000	0.0	0.00%	3068.6	6.53%
AT3G60490(AP2EREBP)/colamp-AT3G60490-DAP-Seq(GSE60143)/Homer	NNRCCGACANNNNNN	1e0	0.000e+00	1.0000	0.0	0.00%	1785.1	3.80%
At4g01280(MYBrelated)/colamp-At4g01280-DAP-Seq(GSE60143)/Homer	AAATATCT	1e0	0.000e+00	1.0000	0.0	0.00%	2704.8	5.76%
AT4G12670(MYBrelated)/col-AT4G12670-DAP-Seq(GSE60143)/Homer	AGGGTTTAGGGTTTA	1e0	0.000e+00	1.0000	0.0	0.00%	11.2	0.02%
AT4G18450(AP2EREBP)/col-AT4G18450-DAP-Seq(GSE60143)/Homer	ATGGCGGCKG	1e0	0.000e+00	1.0000	0.0	0.00%	2634.2	5.61%
AT4G27900(C2C2COlike)/col-AT4G27900-DAP-Seq(GSE60143)/Homer	TCTCVACCGTTSATT	1e0	0.000e+00	1.0000	0.0	0.00%	271.6	0.58%
At4g28140(AP2EREBP)/colamp-At4g28140-DAP-Seq(GSE60143)/Homer	DCCACCGACCAW	1e0	0.000e+00	1.0000	0.0	0.00%	1992.3	4.24%
At4g32800(AP2EREBP)/colamp-At4g32800-DAP-Seq(GSE60143)/Homer	DYCACCGACAHWWWH	1e0	0.000e+00	1.0000	0.0	0.00%	1022.9	2.18%
At5g08330(TCP)/col-At5g08330-DAP-Seq(GSE60143)/Homer	GGRCCCAC	1e0	0.000e+00	1.0000	0.0	0.00%	1093.2	2.33%
At5g22890(C2H2)/col-At5g22890-DAP-Seq(GSE60143)/Homer	NSAGGTKWTATCTGD	1e0	0.000e+00	1.0000	0.0	0.00%	119.9	0.26%
AT5G23930(mTERF)/col-AT5G23930-DAP-Seq(GSE60143)/Homer	GGCGGCTG	1e0	0.000e+00	1.0000	0.0	0.00%	5606.1	11.94%
At5g52660(MYBrelated)/colamp-At5g52660-DAP-Seq(GSE60143)/Homer	HAAAAATATCTW	1e0	0.000e+00	1.0000	0.0	0.00%	2016.2	4.29%
AT5G60130(ABI3VP1)/col-AT5G60130-DAP-Seq(GSE60143)/Homer	WTTYTAAGVAAA	1e0	0.000e+00	1.0000	0.0	0.00%	8355.0	17.79%
At5g65130(AP2EREBP)/colamp-At5g65130-DAP-Seq(GSE60143)/Homer	CCRCCGACAWTN	1e0	0.000e+00	1.0000	0.0	0.00%	1305.5	2.78%
At5g66730(C2H2)/colamp-At5g66730-DAP-Seq(GSE60143)/Homer	TTTGTCKTTTTK	1e0	0.000e+00	1.0000	0.0	0.00%	1498.8	3.19%
ATHB15(HB)/col-ATHB15-DAP-Seq(GSE60143)/Homer	GYAATSATTA	1e0	0.000e+00	1.0000	0.0	0.00%	1943.1	4.14%
AtIDD11(C2H2)/colamp-AtIDD11-DAP-Seq(GSE60143)/Homer	TTTGTCGTTT	1e0	0.000e+00	1.0000	0.0	0.00%	2008.3	4.28%
bHLH10(bHLH)/colamp-bHLH10-DAP-Seq(GSE60143)/Homer	YACCGACA	1e0	0.000e+00	1.0000	0.0	0.00%	1698.6	3.62%
bHLH18(bHLH)/col-bHLH18-DAP-Seq(GSE60143)/Homer	CACGTGTTYCACGTG	1e0	0.000e+00	1.0000	0.0	0.00%	156.4	0.33%
bHLH74(bHLH)/col-bHLH74-DAP-Seq(GSE60143)/Homer	DRATCACGTGAB	1e0	0.000e+00	1.0000	0.0	0.00%	1039.7	2.21%
BIM1(bHLH)/colamp-BIM1-DAP-Seq(GSE60143)/Homer	NNNNNNVTCACGTGM	1e0	0.000e+00	1.0000	0.0	0.00%	596.3	1.27%
BIM3(bHLH)/col-BIM3-DAP-Seq(GSE60143)/Homer	TWVTCACGTGAB	1e0	0.000e+00	1.0000	0.0	0.00%	615.5	1.31%
BPC1(BBRBPC)/colamp-BPC1-DAP-Seq(GSE60143)/Homer	GARGAGAGAGAA	1e0	0.000e+00	1.0000	0.0	0.00%	2383.7	5.08%
BPC6(BBRBPC)/col-BPC6-DAP-Seq(GSE60143)/Homer	YTYTCTCTCTCTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	99.8	0.21%
bZIP42(bZIP)/colamp-bZIP42-DAP-Seq(GSE60143)/Homer	GCCACGTCAGCA	1e0	0.000e+00	1.0000	0.0	0.00%	157.4	0.34%
bZIP69(bZIP)/col-bZIP69-DAP-Seq(GSE60143)/Homer	GACAGCTGKCAW	1e0	0.000e+00	1.0000	0.0	0.00%	137.2	0.29%
BZR1(BZR)/col-BZR1-DAP-Seq(GSE60143)/Homer	NNCRCACGTGCG	1e0	0.000e+00	1.0000	0.0	0.00%	372.0	0.79%
CBF1(AP2EREBP)/colamp-CBF1-DAP-Seq(GSE60143)/Homer	YRCCGACATN	1e0	0.000e+00	1.0000	0.0	0.00%	3775.5	8.04%
CBF2(AP2EREBP)/colamp-CBF2-DAP-Seq(GSE60143)/Homer	YBRCCGACATNNNNN	1e0	0.000e+00	1.0000	0.0	0.00%	3158.0	6.73%
CBF3(AP2EREBP)/colamp-CBF3-DAP-Seq(GSE60143)/Homer	YNRCCGACATNN	1e0	0.000e+00	1.0000	0.0	0.00%	2911.1	6.20%
CBF4(AP2EREBP)/colamp-CBF4-DAP-Seq(GSE60143)/Homer	NRCCGACDWNNNNNN	1e0	0.000e+00	1.0000	0.0	0.00%	4756.1	10.13%
CUC1(NAC)/col-CUC1-DAP-Seq(GSE60143)/Homer	TACTTGTNNNACAAG	1e0	0.000e+00	1.0000	0.0	0.00%	2605.8	5.55%
CUC2(NAC)/colamp-CUC2-DAP-Seq(GSE60143)/Homer	TRCKTGTNNNWCAMG	1e0	0.000e+00	1.0000	0.0	0.00%	2160.9	4.60%
CUC3(NAC)/col-CUC3-DAP-Seq(GSE60143)/Homer	TRCKTGWNNNACAMG	1e0	0.000e+00	1.0000	0.0	0.00%	2212.3	4.71%
DDF1(AP2EREBP)/col-DDF1-DAP-Seq(GSE60143)/Homer	GCCGACAT	1e0	0.000e+00	1.0000	0.0	0.00%	2789.6	5.94%
DDF2(AP2EREBP)/col-DDF2-DAP-Seq(GSE60143)/Homer	GATGTCGRCR	1e0	0.000e+00	1.0000	0.0	0.00%	385.9	0.82%
DEAR3(AP2EREBP)/colamp-DEAR3-DAP-Seq(GSE60143)/Homer	BCACCGACAWNNNNN	1e0	0.000e+00	1.0000	0.0	0.00%	2884.1	6.14%
DEAR5(AP2EREBP)/col-DEAR5-DAP-Seq(GSE60143)/Homer	NDWTGTCGGTGRWDN	1e0	0.000e+00	1.0000	0.0	0.00%	1263.8	2.69%
DEL1(E2FDP)/colamp-DEL1-DAP-Seq(GSE60143)/Homer	TTCCCGCCAA	1e0	0.000e+00	1.0000	0.0	0.00%	23.5	0.05%
DREB19(AP2EREBP)/colamp-DREB19-DAP-Seq(GSE60143)/Homer	AATGTCGGTK	1e0	0.000e+00	1.0000	0.0	0.00%	3925.6	8.36%
DREB2(AP2EREBP)/col-DREB2-DAP-Seq(GSE60143)/Homer	TMACCGACATWA	1e0	0.000e+00	1.0000	0.0	0.00%	3343.1	7.12%
E2FA(E2FDP)/colamp-E2FA-DAP-Seq(GSE60143)/Homer	WWTGGCGCCAWWWNN	1e0	0.000e+00	1.0000	0.0	0.00%	2083.9	4.44%
EPR1(MYBrelated)/colamp-EPR1-DAP-Seq(GSE60143)/Homer	AAATATCT	1e0	0.000e+00	1.0000	0.0	0.00%	1937.1	4.13%
ERF13(AP2EREBP)/colamp-ERF13-DAP-Seq(GSE60143)/Homer	TYAGCCGCCATT	1e0	0.000e+00	1.0000	0.0	0.00%	5636.7	12.00%
ERF1(AP2EREBP)/colamp-ERF1-DAP-Seq(GSE60143)/Homer	GGCGGCTR	1e0	0.000e+00	1.0000	0.0	0.00%	2523.2	5.37%
ERF2(AP2EREBP)/colamp-ERF2-DAP-Seq(GSE60143)/Homer	GGCGGCTG	1e0	0.000e+00	1.0000	0.0	0.00%	2626.0	5.59%
ERF38(AP2EREBP)/col-ERF38-DAP-Seq(GSE60143)/Homer	CACCGACA	1e0	0.000e+00	1.0000	0.0	0.00%	3273.4	6.97%
ERF5(AP2EREBP)/colamp-ERF5-DAP-Seq(GSE60143)/Homer	DCMGCCGCCA	1e0	0.000e+00	1.0000	0.0	0.00%	2689.7	5.73%
ESE1(AP2EREBP)/col-ESE1-DAP-Seq(GSE60143)/Homer	GGCGGCGG	1e0	0.000e+00	1.0000	0.0	0.00%	3362.5	7.16%
FAR1(FAR1)/col-FAR1-DAP-Seq(GSE60143)/Homer	TKNNNYYCACGCGCY	1e0	0.000e+00	1.0000	0.0	0.00%	662.2	1.41%
FHY3(FAR1)/Arabidopsis-FHY3-ChIP-Seq(GSE30711)/Homer	HHCACGCGCBTN	1e0	0.000e+00	1.0000	0.0	0.00%	1338.8	2.85%
FRS9(ND)/col-FRS9-DAP-Seq(GSE60143)/Homer	RGAGAGAGAAAG	1e0	0.000e+00	1.0000	0.0	0.00%	695.0	1.48%
GATA19(C2C2gata)/colamp-GATA19-DAP-Seq(GSE60143)/Homer	ATCSGATCVG	1e0	0.000e+00	1.0000	0.0	0.00%	908.0	1.93%
GATA6(C2C2gata)/col200-GATA6-DAP-Seq(GSE60143)/Homer	TAGATCTARAHH	1e0	0.000e+00	1.0000	0.0	0.00%	621.3	1.32%
GT1(Trihelix)/col-GT1-DAP-Seq(GSE60143)/Homer	TTAACCATGGTTAAD	1e0	0.000e+00	1.0000	0.0	0.00%	97.6	0.21%
HAP3(CCAATHAP3)/col-HAP3-DAP-Seq(GSE60143)/Homer	TGATGGAW	1e0	0.000e+00	1.0000	0.0	0.00%	1968.3	4.19%
HAT1(Homeobox)/col-HAT1-DAP-Seq(GSE60143)/Homer	SCAATCATTGNN	1e0	0.000e+00	1.0000	0.0	0.00%	946.0	2.01%
HSF21(HSF)/col-HSF21-DAP-Seq(GSE60143)/Homer	CTTCTAGAAGMTTYW	1e0	0.000e+00	1.0000	0.0	0.00%	301.7	0.64%
HSF6(HSF)/col-HSF6-DAP-Seq(GSE60143)/Homer	TTYTAGAAGCTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	1043.6	2.22%
HSF7(HSF)/colamp-HSF7-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	859.5	1.83%
HSFA1E(HSF)/col-HSFA1E-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	342.7	0.73%
HSFA6A(HSF)/col-HSFA6A-DAP-Seq(GSE60143)/Homer	RGAAGNTTCTAGAAN	1e0	0.000e+00	1.0000	0.0	0.00%	136.4	0.29%
HSFB3(HSF)/colamp-HSFB3-DAP-Seq(GSE60143)/Homer	TTCTAGAAGMTTHTW	1e0	0.000e+00	1.0000	0.0	0.00%	195.4	0.42%
HSFB4(HSF)/col-HSFB4-DAP-Seq(GSE60143)/Homer	TTCTAGAAGCTTCTA	1e0	0.000e+00	1.0000	0.0	0.00%	153.1	0.33%
HSFC1(HSF)/col-HSFC1-DAP-Seq(GSE60143)/Homer	HTTCTAGAADCTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	735.1	1.57%
IDD2(C2H2)/colamp-IDD2-DAP-Seq(GSE60143)/Homer	HAVAAAAMGACAAAA	1e0	0.000e+00	1.0000	0.0	0.00%	693.3	1.48%
IDD7(C2H2)/col-IDD7-DAP-Seq(GSE60143)/Homer	TTTGTCKTTTTN	1e0	0.000e+00	1.0000	0.0	0.00%	2113.9	4.50%
JKD(C2H2)/col-JKD-DAP-Seq(GSE60143)/Homer	TTTTGTCGTTTT	1e0	0.000e+00	1.0000	0.0	0.00%	1138.3	2.42%
LCL1(MYBrelated)/colamp-LCL1-DAP-Seq(GSE60143)/Homer	NAAAATATCTWHWWN	1e0	0.000e+00	1.0000	0.0	0.00%	584.2	1.24%
LEP(AP2EREBP)/col-LEP-DAP-Seq(GSE60143)/Homer	CDCCGCCGTC	1e0	0.000e+00	1.0000	0.0	0.00%	2315.8	4.93%
LHY1(MYBrelated)/col-LHY1-DAP-Seq(GSE60143)/Homer	AAATATCT	1e0	0.000e+00	1.0000	0.0	0.00%	1937.1	4.13%
LHY(Myb)/Seedling-LHY-ChIP-Seq(GSE52175)/Homer	ADAAATATCT	1e0	0.000e+00	1.0000	0.0	0.00%	5781.5	12.31%
MGP(C2H2)/colamp-MGP-DAP-Seq(GSE60143)/Homer	TTTTGTCGTTTW	1e0	0.000e+00	1.0000	0.0	0.00%	1699.9	3.62%
MYB113(MYB)/col-MYB113-DAP-Seq(GSE60143)/Homer	HNDAWTCMGTTAYWN	1e0	0.000e+00	1.0000	0.0	0.00%	4290.5	9.14%
MYB116(MYB)/colamp-MYB116-DAP-Seq(GSE60143)/Homer	AGTTAGGCAN	1e0	0.000e+00	1.0000	0.0	0.00%	2956.8	6.30%
MYB121(MYB)/col-MYB121-DAP-Seq(GSE60143)/Homer	YNTACCTAACWW	1e0	0.000e+00	1.0000	0.0	0.00%	1802.9	3.84%
MYB17(MYB)/colamp-MYB17-DAP-Seq(GSE60143)/Homer	GGTAGGTGRG	1e0	0.000e+00	1.0000	0.0	0.00%	2265.1	4.82%
MYB27(MYB)/colamp-MYB27-DAP-Seq(GSE60143)/Homer	TACCTAACWT	1e0	0.000e+00	1.0000	0.0	0.00%	924.0	1.97%
MYB33(MYB)/col-MYB33-DAP-Seq(GSE60143)/Homer	DDTYNGTTAN	1e0	0.000e+00	1.0000	52.0	11.11%	12597.0	26.83%
MYB39(MYB)/col-MYB39-DAP-Seq(GSE60143)/Homer	WWAARKTAGGTGRAA	1e0	0.000e+00	1.0000	0.0	0.00%	817.3	1.74%
MYB3R4(MYB)/col-MYB3R4-DAP-Seq(GSE60143)/Homer	AWWTAACCGTTR	1e0	0.000e+00	1.0000	0.0	0.00%	2842.4	6.05%
MYB3R5(MYB)/col-MYB3R5-DAP-Seq(GSE60143)/Homer	THYAACGGTHAWAWT	1e0	0.000e+00	1.0000	0.0	0.00%	1539.1	3.28%
MYB44(MYB)/colamp-MYB44-DAP-Seq(GSE60143)/Homer	CVGTTWWKTCNGTTA	1e0	0.000e+00	1.0000	0.0	0.00%	686.3	1.46%
MYB56(MYB)/colamp-MYB56-DAP-Seq(GSE60143)/Homer	HTAACGRMHY	1e0	0.000e+00	1.0000	0.0	0.00%	6879.2	14.65%
MYB57(MYB)/col-MYB57-DAP-Seq(GSE60143)/Homer	TTACCTAACT	1e0	0.000e+00	1.0000	0.0	0.00%	2433.3	5.18%
MYB94(MYB)/col-MYB94-DAP-Seq(GSE60143)/Homer	WGGTRGTTGGKA	1e0	0.000e+00	1.0000	0.0	0.00%	1812.1	3.86%
MYB99(MYB)/colamp-MYB99-DAP-Seq(GSE60143)/Homer	GGTAGGTG	1e0	0.000e+00	1.0000	0.0	0.00%	4536.1	9.66%
NST1(NAC)/colamp-NST1-DAP-Seq(GSE60143)/Homer	WRCTTRWWNWWYAAG	1e0	0.000e+00	1.0000	0.0	0.00%	4779.9	10.18%
NTM1(NAC)/col-NTM1-DAP-Seq(GSE60143)/Homer	ACTTRTARAASAAGT	1e0	0.000e+00	1.0000	0.0	0.00%	1906.6	4.06%
NTM2(NAC)/col-NTM2-DAP-Seq(GSE60143)/Homer	CTTRTNNNAYAAGBH	1e0	0.000e+00	1.0000	0.0	0.00%	2793.6	5.95%
NUC(C2H2)/col-NUC-DAP-Seq(GSE60143)/Homer	HAVAAAACGACAAAA	1e0	0.000e+00	1.0000	0.0	0.00%	528.1	1.12%
PCF/Arabidopsis-Promoters/Homer	NNWWWTGGGCYTDDN	1e0	0.000e+00	1.0000	0.0	0.00%	1399.0	2.98%
PLT1(AP2EREBP)/colamp-PLT1-DAP-Seq(GSE60143)/Homer	GCACGAWTYCCGAGG	1e0	0.000e+00	1.0000	0.0	0.00%	299.4	0.64%
PLT3(AP2EREBP)/col-PLT3-DAP-Seq(GSE60143)/Homer	GCACGNWTHYCGAGG	1e0	0.000e+00	1.0000	0.0	0.00%	226.8	0.48%
PTF1(TCP)/colamp-PTF1-DAP-Seq(GSE60143)/Homer	RDDGGGACCACA	1e0	0.000e+00	1.0000	0.0	0.00%	171.4	0.37%
Rap210(AP2EREBP)/col-Rap210-DAP-Seq(GSE60143)/Homer	TGTCGGCA	1e0	0.000e+00	1.0000	0.0	0.00%	3396.0	7.23%
RAP211(AP2EREBP)/colamp-RAP211-DAP-Seq(GSE60143)/Homer	RGCCGGCYWW	1e0	0.000e+00	1.0000	0.0	0.00%	6859.1	14.61%
RAP21(AP2EREBP)/colamp-RAP21-DAP-Seq(GSE60143)/Homer	BCACCGACAHNN	1e0	0.000e+00	1.0000	0.0	0.00%	1550.7	3.30%
REM16(ABI3VP1)/col-REM16-DAP-Seq(GSE60143)/Homer	DTTTTTSCCGSMAAA	1e0	0.000e+00	1.0000	0.0	0.00%	12.0	0.03%
REM19(REM)/colamp-REM19-DAP-Seq(GSE60143)/Homer	AAAAAAAA	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
SGR5(C2H2)/colamp-SGR5-DAP-Seq(GSE60143)/Homer	TTTGTCTTTTTT	1e0	0.000e+00	1.0000	0.0	0.00%	3038.1	6.47%
SND2(NAC)/colamp-SND2-DAP-Seq(GSE60143)/Homer	CTTVWNNNWBAAGNW	1e0	0.000e+00	1.0000	0.0	0.00%	3069.9	6.54%
SND3(NAC)/col-SND3-DAP-Seq(GSE60143)/Homer	CTTNHNNNDNAAGNH	1e0	0.000e+00	1.0000	0.0	0.00%	4005.9	8.53%
SOC1(MADS)/Seedling-SOC1-ChIP-Seq(GSE45846)/Homer	TWCCAWWTWTGG	1e0	0.000e+00	1.0000	0.0	0.00%	1707.9	3.64%
SPL11(SBP)/col100-SPL11-DAP-Seq(GSE60143)/Homer	YTGTACTTBH	1e0	0.000e+00	1.0000	0.0	0.00%	2627.2	5.59%
SPL3(SBP)/colamp-SPL3-DAP-Seq(GSE60143)/Homer	WDTTGTACGGAH	1e0	0.000e+00	1.0000	0.0	0.00%	643.2	1.37%
STOP1(C2H2)/colamp-STOP1-DAP-Seq(GSE60143)/Homer	DTATCTGGKGRAGGT	1e0	0.000e+00	1.0000	0.0	0.00%	1543.9	3.29%
STZ(C2H2)/colamp-STZ-DAP-Seq(GSE60143)/Homer	HNBTCACT	1e0	0.000e+00	1.0000	130.0	27.78%	21945.1	46.73%
TCP16(TCP)/colamp-TCP16-DAP-Seq(GSE60143)/Homer	GTGGDCCYNNNNNNN	1e0	0.000e+00	1.0000	0.0	0.00%	1159.1	2.47%
TCP17(TCP)/col-TCP17-DAP-Seq(GSE60143)/Homer	GTGGTCCCCA	1e0	0.000e+00	1.0000	0.0	0.00%	70.9	0.15%
TCP1(TCP)/col-TCP1-DAP-Seq(GSE60143)/Homer	GGGGGCCCMMCN	1e0	0.000e+00	1.0000	0.0	0.00%	308.3	0.66%
TCP20(TCP)/col-TCP20-DAP-Seq(GSE60143)/Homer	GGDCCCAC	1e0	0.000e+00	1.0000	0.0	0.00%	481.1	1.02%
TCP3(TCP)/colamp-TCP3-DAP-Seq(GSE60143)/Homer	WGTGGTCCCAAHWWW	1e0	0.000e+00	1.0000	0.0	0.00%	925.5	1.97%
TCP7(TCP)/col-TCP7-DAP-Seq(GSE60143)/Homer	GTGGGSCCCACHHNN	1e0	0.000e+00	1.0000	0.0	0.00%	773.1	1.65%
TGA3(bZIP)/colamp-TGA3-DAP-Seq(GSE60143)/Homer	WTGATGACGTCATCW	1e0	0.000e+00	1.0000	0.0	0.00%	274.0	0.58%
TGA5(bZIP)/col-TGA5-DAP-Seq(GSE60143)/Homer	NNGATGACGTCATCN	1e0	0.000e+00	1.0000	0.0	0.00%	425.0	0.91%
TINY(AP2EREBP)/col-TINY-DAP-Seq(GSE60143)/Homer	NNCACCGACA	1e0	0.000e+00	1.0000	0.0	0.00%	1485.8	3.16%
TSO1(CPP)/col-TSO1-DAP-Seq(GSE60143)/Homer	RAATTTRAAW	1e0	0.000e+00	1.0000	0.0	0.00%	645.0	1.37%
VIP1(bZIP)/col-VIP1-DAP-Seq(GSE60143)/Homer	NTTGACAGCTGTCAN	1e0	0.000e+00	1.0000	0.0	0.00%	243.5	0.52%
VND1(NAC)/col-VND1-DAP-Seq(GSE60143)/Homer	CTTRWDNHWYAAGYW	1e0	0.000e+00	1.0000	0.0	0.00%	4389.0	9.35%
VND3(NAC)/colamp-VND3-DAP-Seq(GSE60143)/Homer	TRCTTGWDNHWCAAG	1e0	0.000e+00	1.0000	0.0	0.00%	3627.4	7.72%
VRN1(ABI3VP1)/col-VRN1-DAP-Seq(GSE60143)/Homer	TTTTTTTTTT	1e0	0.000e+00	1.0000	0.0	0.00%	0.0	0.00%
WRKY7(WRKY)/colamp-WRKY7-DAP-Seq(GSE60143)/Homer	AAAAGTCAACGSHWD	1e0	0.000e+00	1.0000	0.0	0.00%	41.6	0.09%
WUS1(Homeobox)/colamp-WUS1-DAP-Seq(GSE60143)/Homer	CAWTCATTCA	1e0	0.000e+00	1.0000	0.0	0.00%	1635.9	3.48%
ZIM(C2C2gata)/col-ZIM-DAP-Seq(GSE60143)/Homer	ATCSRACGGTYRAGA	1e0	0.000e+00	1.0000	0.0	0.00%	662.6	1.41%
ZML1(C2C2gata)/colamp-ZML1-DAP-Seq(GSE60143)/Homer	ATCWYRACCGTTSRW	1e0	0.000e+00	1.0000	0.0	0.00%	695.9	1.48%
DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer	TAGCGCGC	1e0	0.000e+00	1.0000	0.0	0.00%	1653.7	3.52%
EFL-1(E2F)/cElegans-L1-EFL1-ChIP-Seq(modEncode)/Homer	TGCAARYGCGCTCYA	1e0	0.000e+00	1.0000	0.0	0.00%	26.2	0.06%
ELT-3(Gata)/cElegans-L1-ELT3-ChIP-Seq(modEncode)/Homer	AWTGATAAGA	1e0	0.000e+00	1.0000	0.0	0.00%	2648.7	5.64%
GEI-11(Myb?)/cElegans-L4-GEI11-ChIP-Seq(modEncode)/Homer	CCGACAYYTYACGGG	1e0	0.000e+00	1.0000	0.0	0.00%	154.5	0.33%
LIN-15B(Zf)/cElegans-L3-LIN15B-ChIP-Seq(modEncode)/Homer	CARTGGAGCGCRYTTGCATT	1e0	0.000e+00	1.0000	0.0	0.00%	7.4	0.02%
PQM-1(?)/cElegans-L3-ChIP-Seq(modEncode)/Homer	ACTGATAAGA	1e0	0.000e+00	1.0000	0.0	0.00%	2204.3	4.69%
Cbf1(bHLH)/Yeast-Cbf1-ChIP-Seq(GSE29506)/Homer	TCACGTGAYH	1e0	0.000e+00	1.0000	0.0	0.00%	1102.1	2.35%
RLR1?/SacCer-Promoters/Homer	WTTTTCYYTTTT	1e0	0.000e+00	1.0000	0.0	0.00%	1121.8	2.39%