Homer de novo Motif Results (08-homer/casevscontrol_up/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 468
Total background sequences = 47264
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A C T G C G T A A C T G A C G T A C G T C G T A A G T C A T C G C T G A A G C T A C G T A C T G 1e-251-5.780e+0233.33%0.38%44.4bp (59.0bp)PB0037.1_Isgf3g_1/Jaspar(0.695)
More Information | Similar Motifs Found		motif file (matrix)
2 A G T C A C G T A T G C A G T C A C T G C G T A C T G A A C G T C G A T A G C T A C G T A C T G 1e-191-4.419e+0222.22%0.14%43.7bp (53.7bp)Ng_0261(RRM)/Naegleria_gruberi-RNCMPT00261-PBM/HughesRNA(0.702)
More Information | Similar Motifs Found		motif file (matrix)
3 A T G C C G T A C T A G G C A T A G C T A C G T A G C T A T G C C G T A A C G T A C T G A C T G 1e-184-4.257e+0238.89%1.81%59.7bp (59.5bp)Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer(0.732)
More Information | Similar Motifs Found		motif file (matrix)
4 A G T C A C T G A C G T C G A T A G T C A G T C A G C T C G T A A C G T G T A C 1e-177-4.091e+0227.78%0.53%38.0bp (68.8bp)Lm_0254(RRM)/Leishmania_major-RNCMPT00254-PBM/HughesRNA(0.697)
More Information | Similar Motifs Found		motif file (matrix)
5 A C G T A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T C G T A A G T C A C G T 1e-173-3.990e+0211.11%0.00%32.5bp (0.0bp)RIM101/MA0368.1/Jaspar(0.721)
More Information | Similar Motifs Found		motif file (matrix)
6 A T C G A C G T C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C T G C G T A A C T G 1e-173-3.990e+0211.11%0.00%50.0bp (12.2bp)ASD-1(RRM)/Caenorhabditis_elegans-RNCMPT00180-PBM/HughesRNA(0.703)
More Information | Similar Motifs Found		motif file (matrix)
7 A G T C A C T G A C G T A C T G A C G T A C G T A C T G A C G T A C G T A C T G A G T C C G T A 1e-173-3.990e+0211.11%0.00%31.0bp (22.7bp)Aef1/dmmpmm(Pollard)/fly(0.759)
More Information | Similar Motifs Found		motif file (matrix)
8 A C G T C G T A A G T C A G T C C G T A A C G T A C T G C G T A A C G T A G T C C G T A A C G T 1e-173-3.990e+0211.11%0.00%57.5bp (0.0bp)Tv_0259(RRM)/Trichomonas_vaginalis-RNCMPT00259-PBM/HughesRNA(0.731)
More Information | Similar Motifs Found		motif file (matrix)
9 A T G C A C G T A G T C A G T C A C T G A G C T A C G T A T G C C T G A G C A T C G T A A C G T 1e-160-3.688e+0216.67%0.06%36.8bp (45.1bp)YKL222C/MA0428.1/Jaspar(0.658)
More Information | Similar Motifs Found		motif file (matrix)
10 A G T C A G T C C G T A A T C G A C T G A C T G A G T C A C G T A G T C A C G T A G T C C G T A 1e-157-3.629e+0211.11%0.00%54.0bp (33.9bp)Su(H)/dmmpmm(Bergman)/fly(0.620)
More Information | Similar Motifs Found		motif file (matrix)
11 A C G T A G T C A C T G A C T G C G T A A C G T A C T G C G T A A G C T A C T G C G T A C G T A 1e-157-3.629e+0211.11%0.00%1.0bp (26.2bp)PB0108.1_Atf1_2/Jaspar(0.680)
More Information | Similar Motifs Found		motif file (matrix)
12 A C T G C T A G T A C G C G A T A C G T A C G T A T C G C A T G C T G A A C T G 1e-149-3.432e+0250.00%6.24%45.0bp (63.0bp)HNRNPK(KH)/Homo_sapiens-RNCMPT00026-PBM/HughesRNA(0.666)
More Information | Similar Motifs Found		motif file (matrix)
13 C T A G C T A G A C G T C G T A A C G T C G T A G T A C A G T C A G C T G T A C 1e-147-3.387e+0222.22%0.37%33.3bp (62.5bp)TaMYB80(MYB)/Triticum aestivum/AthaMap(0.665)
More Information | Similar Motifs Found		motif file (matrix)
14 A C T G A C T G C G T A G A C T G T A C C G T A T C A G A C G T A G T C A C G T 1e-146-3.364e+0222.22%0.38%65.0bp (59.6bp)EDS1/MA0294.1/Jaspar(0.669)
More Information | Similar Motifs Found		motif file (matrix)
15 C T G A C T G A A C G T A G C T C G T A C G T A A C G T A G T C A C G T C G T A A C T G G T C A 1e-141-3.269e+0211.11%0.01%61.5bp (28.3bp)ABF2/MA0266.1/Jaspar(0.730)
More Information | Similar Motifs Found		motif file (matrix)
16 A G T C A C T G A C G T A G T C A C T G A C G T A C G T A T C G C G T A A G T C C G T A C G T A 1e-141-3.269e+0211.11%0.01%12.5bp (27.2bp)Rbm4.3(RRM)/Danio_rerio-RNCMPT00248-PBM/HughesRNA(0.714)
More Information | Similar Motifs Found		motif file (matrix)
17 A C T G C T A G A C T G C G T A A C G T G T A C C G T A A C T G C T G A A C G T 1e-140-3.239e+0222.22%0.43%50.9bp (64.7bp)At5g05790(MYBrelated)/col-At5g05790-DAP-Seq(GSE60143)/Homer(0.709)
More Information | Similar Motifs Found		motif file (matrix)
18 A G T C A C G T C G T A C G T A C G T A A C G T C G T A A G T C C G T A C G T A 1e-140-3.234e+0216.67%0.11%24.6bp (72.6bp)br-Z1/dmmpmm(Pollard)/fly(0.738)
More Information | Similar Motifs Found		motif file (matrix)
19 A C G T A C T G C T G A G A T C G T A C A C G T C G T A A C G T C G T A C G T A 1e-137-3.161e+0222.22%0.46%41.3bp (66.1bp)MOT2/MA0379.1/Jaspar(0.686)
More Information | Similar Motifs Found		motif file (matrix)
20 C G T A A G T C C T G A A G T C C G T A A C G T A C G T C G T A C G T A C G T A A G T C A C T G 1e-136-3.153e+0211.11%0.01%70.6bp (25.5bp)EGL-5(Homeobox)/cElegans-L3-EGL5-ChIP-Seq(modEncode)/Homer(0.766)
More Information | Similar Motifs Found		motif file (matrix)
21 A C G T A G T C A C T G A C G T C G A T A C G T A C T G A C T G C G T A A G T C 1e-131-3.038e+0216.67%0.14%10.7bp (72.5bp)UPC2/MA0411.1/Jaspar(0.738)
More Information | Similar Motifs Found		motif file (matrix)
22 C G T A C G T A A C G T A T G C A T C G T G C A A C G T A C G T A C G T A T C G A C G T G T A C 1e-116-2.690e+0216.67%0.22%30.8bp (63.0bp)GRHL1/MA0647.1/Jaspar(0.659)
More Information | Similar Motifs Found		motif file (matrix)
23 A G C T C T A G A C T G A T G C A C G T A T C G T A C G A C G T A G C T C T A G A C G T A C G T 1e-115-2.669e+0216.67%0.23%57.6bp (67.8bp)AT1G24250(Orphan)/col-AT1G24250-DAP-Seq(GSE60143)/Homer(0.780)
More Information | Similar Motifs Found		motif file (matrix)
24 C G T A A C G T A C G T A G C T C G T A G A C T T C A G C T G A A C G T A C T G A C T G C G T A 1e-108-2.488e+0211.11%0.04%25.5bp (63.3bp)MOD(RRM)/Drosophila_melanogaster-RNCMPT00140-PBM/HughesRNA(0.624)
More Information | Similar Motifs Found		motif file (matrix)
25 A C T G A C T G A G T C C G T A C G T A A G T C A C G T A C G T A G T C A C G T 1e-106-2.460e+0211.11%0.04%35.0bp (58.8bp)bHLH130(bHLH)/col-bHLH130-DAP-Seq(GSE60143)/Homer(0.706)
More Information | Similar Motifs Found		motif file (matrix)
26 C G T A C G T A C G T A A G T C A C G T A C G T C G T A C G T A A C G T A G T C 1e-105-2.433e+0211.11%0.04%54.5bp (71.4bp)EXC-7(RRM)/Caenorhabditis_elegans-RNCMPT00014-PBM/HughesRNA(0.802)
More Information | Similar Motifs Found		motif file (matrix)
27 A C T G A G T C A G T C A G T C A C G T A G C T C G T A A C T G 1e-104-2.401e+0227.78%2.03%52.9bp (62.2bp)AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer(0.692)
More Information | Similar Motifs Found		motif file (matrix)
28 A C G T C G T A A G T C A G T C C G T A C G T A C G T A A G T C C G T A A G T C 1e-94-2.174e+0211.11%0.07%24.0bp (50.3bp)GTS1(MacIsaac)/Yeast(0.769)
More Information | Similar Motifs Found		motif file (matrix)
29 C G T A A C G T A C G T A G T C A C G T A G C T A T C G G C A T G T A C G T C A 1e-84-1.942e+0222.22%1.55%23.2bp (56.7bp)At3g24120(G2like)/col-At3g24120-DAP-Seq(GSE60143)/Homer(0.660)
More Information | Similar Motifs Found		motif file (matrix)
30 G T C A A C G T A C G T A C T G A C T G C T A G A G T C C G T A 1e-81-1.885e+0216.67%0.64%20.9bp (62.8bp)PB0133.1_Hic1_2/Jaspar(0.868)
More Information | Similar Motifs Found		motif file (matrix)
31 C G T A A G T C C G T A A G T C A C G T C G T A A C T G A C T G A C T G A G T C 1e-78-1.818e+025.56%0.00%0.0bp (0.0bp)TBP3(MYBrelated)/col-TBP3-DAP-Seq(GSE60143)/Homer(0.759)
More Information | Similar Motifs Found		motif file (matrix)
32 A C G T A G T C A C G T A C T G A C T G A C T G C G T A A C T G A C T G A G T C 1e-78-1.818e+025.56%0.00%0.0bp (17.7bp)GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer(0.777)
More Information | Similar Motifs Found		motif file (matrix)
33 C T G A T A C G G A T C C G T A A T C G C G A T C T A G C A G T 1e-76-1.751e+0244.44%10.75%46.2bp (61.9bp)AZF1(C2H2)/colamp-AZF1-DAP-Seq(GSE60143)/Homer(0.736)
More Information | Similar Motifs Found		motif file (matrix)
34 T A C G G A T C A G C T C G T A G T A C C G T A G A C T A T C G 1e-75-1.737e+0222.22%1.91%55.3bp (70.6bp)MAL8P1.40(RRM)/Plasmodium_falciparum-RNCMPT00197-PBM/HughesRNA(0.893)
More Information | Similar Motifs Found		motif file (matrix)
35 A C G T G T A C A G T C A C T G A C T G A C G T A C G T A C G T 1e-72-1.660e+0227.78%3.76%58.3bp (72.7bp)AT1G76870(Trihelix)/col-AT1G76870-DAP-Seq(GSE60143)/Homer(0.822)
More Information | Similar Motifs Found		motif file (matrix)
36 A C T G A C T G A C T G C G T A A C G T A C T G C G T A A G T C C G T A A G T C 1e-71-1.638e+025.56%0.01%0.0bp (31.1bp)ems/dmmpmm(Pollard)/fly(0.730)
More Information | Similar Motifs Found		motif file (matrix)
37 A C T G A C T G A G T C A G T C A C T G A C G T A C G T A G T C A C T G A C T G 1e-71-1.638e+025.56%0.00%0.0bp (49.4bp)SPL1/MA1055.1/Jaspar(0.734)
More Information | Similar Motifs Found		motif file (matrix)
38 C G T A A G T C A C G T C G T A A C G T A C T G A C G T A G T C 1e-68-1.579e+0216.67%0.97%6.9bp (70.2bp)Tb_0216(RRM)/Trypanosoma_brucei-RNCMPT00216-PBM/HughesRNA(0.785)
More Information | Similar Motifs Found		motif file (matrix)